Gene Amir_1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1279 
Symbol 
ID8325456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp1417952 
End bp1418599 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content67% 
IMG OID644941824 
Productprotein of unknown function DUF218 
Protein accessionYP_003099077 
Protein GI256375417 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATTCCCGACG AGCACCGCGC TGACGTGGTG ACGTTGTGGG AGTACCACGA TATGAAGCAC 
GACCTGCGGC CCACCGACAT CGGCATCGGG TTGGGCAGCC ATGACATCGG CGTGGCCGTG 
CGGGTGACCG AGCTGTACCA CCAGGGTGTG TTCCCTCGGG TGCTGTTCAC CGGGGCGAAC 
GCGCCGACGA CGGTGAAGCG GTTCCCGCGA GGCGAGGCGG TGCACTACCG CGAGCACGCC 
TTGGAGCACG GCGTCCCGGA CGCGGCGATC CTCATCGAGA CCGAGGCGAC CAACACGGCC 
GAGAACTTCA AACTGTCCCG CGCGCTCCTG GAGGTCGAGG GCGTCGAGGT CGGTTCTGCG 
GTGCTGATCT CGCGGCCGTA CCAGGAGCGC CGGTCGTACG CGACGTGCCG GAAGCTGTGG 
CCGGAGCTGG ACATCCTGTG CACGTCGCAC CGGCCGCCGT TGGACGAGTA CGTCGCGGGG 
ATCGGCGATG TCGACTTCGT GATCAGCATG ATGGTCGGCG ACAGCCAGCG GATGACCTTG 
TTCGCGGAGT ACGGCTACGC CATCCCCCAG GACGTGCCGG ACGAGGTCCA GGCCGCCTAC 
GAACGTCTTG TGGCTGCGGG CTACACGAGC CGCGTGATCC AGACCTGA
 
Protein sequence
MPDEHRADVV TLWEYHDMKH DLRPTDIGIG LGSHDIGVAV RVTELYHQGV FPRVLFTGAN 
APTTVKRFPR GEAVHYREHA LEHGVPDAAI LIETEATNTA ENFKLSRALL EVEGVEVGSA 
VLISRPYQER RSYATCRKLW PELDILCTSH RPPLDEYVAG IGDVDFVISM MVGDSQRMTL 
FAEYGYAIPQ DVPDEVQAAY ERLVAAGYTS RVIQT