Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1260 |
Symbol | |
ID | 8325437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1400358 |
End bp | 1401101 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644941805 |
Product | hypothetical protein |
Protein accession | YP_003099058 |
Protein GI | 256375398 |
COG category | [S] Function unknown |
COG ID | [COG3689] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGCGCG AGACCCAGAA CGTGCTGCTC GTGCTGCTCG GCGGCGCGCT GCTGAAGCTG GCGCTGACCG GGACGTACCT GCGGTACGTG AAGGCGTCGC TGCAACCGTG GCTGGTGGCC ACGGGGGTGG TGATGGTGCT GCTGGCCGTG GTGGCGATCG TGCGGGACGT GCGGGCCCAG CACGCCAGGG CGACCTCCGG CGAGCCCGAG GCGCACGACG ACCACGAGCA CGGCGACCAC GAGCACGGGG GCAGCCGCAG CCCGTGGCTG CTCCTGCTGC CGGTGCTGGC GGTGTTCCTG ATCAGCCCGC CCGCGCTCGG CTCGGACAGC GTCAGCCGGG CCGACGACGG GCAGCCGCAG GCGCAGTCGT CCTCCGGCGG GTTCGCGCCG CTGGCCGACG ACGCGGTGGT GCCGCTGACC ATCACCGAGT TCGTCACCCG CACCGCGTGG GACGACTCCG GCTCGCTCGA CGACCGCACC GTGCGGCTCA CCGGGTTCGT GGCGCGGGTC GACGGGCAGG TGTTCGTGGC GCGCCTGGCG ATCTCCTGCT GCGCCGCCGA CGCCCGGCCG ATCAAGGTGC TGCTCACCGG CGCGGACATG GGCGTGTGGG CGACCGACCA GTGGGTCGAG GTGACCGGGC GGTACGTGCC GGGCACGGCC ACGAAGGAGA CCGCGTACGT GCCCACGTTC ACCGTGGGCG AGGTCGTCCC CATCGCCGCG CCCCGGGAGA CCTACGAGGG CTAG
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Protein sequence | MRRETQNVLL VLLGGALLKL ALTGTYLRYV KASLQPWLVA TGVVMVLLAV VAIVRDVRAQ HARATSGEPE AHDDHEHGDH EHGGSRSPWL LLLPVLAVFL ISPPALGSDS VSRADDGQPQ AQSSSGGFAP LADDAVVPLT ITEFVTRTAW DDSGSLDDRT VRLTGFVARV DGQVFVARLA ISCCAADARP IKVLLTGADM GVWATDQWVE VTGRYVPGTA TKETAYVPTF TVGEVVPIAA PRETYEG
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