Gene Amir_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1260 
Symbol 
ID8325437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1400358 
End bp1401101 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content74% 
IMG OID644941805 
Producthypothetical protein 
Protein accessionYP_003099058 
Protein GI256375398 
COG category[S] Function unknown 
COG ID[COG3689] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGCGCG AGACCCAGAA CGTGCTGCTC GTGCTGCTCG GCGGCGCGCT GCTGAAGCTG 
GCGCTGACCG GGACGTACCT GCGGTACGTG AAGGCGTCGC TGCAACCGTG GCTGGTGGCC
ACGGGGGTGG TGATGGTGCT GCTGGCCGTG GTGGCGATCG TGCGGGACGT GCGGGCCCAG
CACGCCAGGG CGACCTCCGG CGAGCCCGAG GCGCACGACG ACCACGAGCA CGGCGACCAC
GAGCACGGGG GCAGCCGCAG CCCGTGGCTG CTCCTGCTGC CGGTGCTGGC GGTGTTCCTG
ATCAGCCCGC CCGCGCTCGG CTCGGACAGC GTCAGCCGGG CCGACGACGG GCAGCCGCAG
GCGCAGTCGT CCTCCGGCGG GTTCGCGCCG CTGGCCGACG ACGCGGTGGT GCCGCTGACC
ATCACCGAGT TCGTCACCCG CACCGCGTGG GACGACTCCG GCTCGCTCGA CGACCGCACC
GTGCGGCTCA CCGGGTTCGT GGCGCGGGTC GACGGGCAGG TGTTCGTGGC GCGCCTGGCG
ATCTCCTGCT GCGCCGCCGA CGCCCGGCCG ATCAAGGTGC TGCTCACCGG CGCGGACATG
GGCGTGTGGG CGACCGACCA GTGGGTCGAG GTGACCGGGC GGTACGTGCC GGGCACGGCC
ACGAAGGAGA CCGCGTACGT GCCCACGTTC ACCGTGGGCG AGGTCGTCCC CATCGCCGCG
CCCCGGGAGA CCTACGAGGG CTAG
 
Protein sequence
MRRETQNVLL VLLGGALLKL ALTGTYLRYV KASLQPWLVA TGVVMVLLAV VAIVRDVRAQ 
HARATSGEPE AHDDHEHGDH EHGGSRSPWL LLLPVLAVFL ISPPALGSDS VSRADDGQPQ
AQSSSGGFAP LADDAVVPLT ITEFVTRTAW DDSGSLDDRT VRLTGFVARV DGQVFVARLA
ISCCAADARP IKVLLTGADM GVWATDQWVE VTGRYVPGTA TKETAYVPTF TVGEVVPIAA
PRETYEG