| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1251 |
|---|
| Symbol | |
|---|
| ID | 8325428 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 1393502 |
|---|
| End bp | 1394809 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644941796 |
|---|
| Product | CBS domain-containing protein |
|---|
| Protein accession | YP_003099049 |
|---|
| Protein GI | 256375389 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1253] Hemolysins and related proteins containing CBS domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATAGCCG GTTCCACCGG GCTGCTGGTG CTGGCGGTCC TGCTCATCCT GGCCGCGGGC
GCGTTCGCCG GGGTCGACGC GGCGCTGGGC ACGGTGTCGC GGGCCCGCGT CGAGGCGCTG
CTGCGGCAGA ACAAGCCGGG CGCCAAGCAG CTGATGATGG TGCTGGGCGA CCGGCCCAGG
CACGTGAACC TGCTCCTGCT GCTGCGCCTG GGCTGCGAGC TGTCCGCGAC GGTCCTGGTG
ACCGTGGTCA GCTTCCGGCT GGTGCCGGTG GGCTGGGCGG CGGTGCTGAC GGCGGGCGCG
AGCATGCTGG TCGTGTCGTA CGTGCTGGTC GGCGTGGGTC CGCGCACCCT GGGCCGCCAG
CACCCGTACG CGGTGAGCCT GCTGGCCGCC GCGCCCGTGC GGGTGCTCGG CCGGGTGCTG
GGGCCGCTGA GCAAGCTGCT GATCCTGGTC GGCAACGCGA TCACGCCGGG CAAGGGCTTC
CGCGAGGGTC CGTTCTCGTC CGAGGTGGAG CTGCGCGAGC TGGTCGACAT GGCGCAGGAG
CGCGGCGTCG TCGACGAGGG CGAGCGCGAG ATGATCCACT CGGTGTTCGA GCTGGGTGAC
ACCATCGCCC GCGAGGTGAT GGTGCCGCGC ACCGAGATCG TGTGGATCGA GCAGGCCAAG
TCGGTGCGGC AGGCGCTGGC GCTGTCGCTG CGCACCGGGT ACACGCGGGT GCCGGTGATC
GGCGAGAGCG TGGACGACAT CGTCGGCGTG GTGAACCTGA AGGACCTGGT GCGGATCGCG
CTGTCCGAGC AGCCGAACGG CAAGCTCGTG TCGGACGTGA TGCGTTCGCC CGCGTTCATC
CCGGACACCA AGCCGGTCGC GGACCTGCTG CGGGAGATGC AGCTGTCGCG CAACCACCTG
GCGGTCGTGG TGGACGAGTA CGGCGGCACG GCCGGGCTGC TGACCATCGA GGACATCCTG
GAGGAGATCG TCGGGGAGAT CACCGACGAG TCCGACACGG ACGACCGGCA GCCGGTGGAG
TACCTGGCGG ACGGGGCGGT GCGGGTGAGC GCGAGGCTGC CCGTGGACGA CCTGGACTCG
CTGTTCGGCA CCGAGCTGGA CGACCACGAG GTGGAGACGG TCGGAGGTCT GCTCGCGCAG
CGCCTGGGCC GGGTCCCGCT GCCGGGCACC GAGGCCGAGA TCGCCGGGCT GCGGATGCGC
GCCGAGGGCG GCAAGGACGA GCGGGGCCGG ATGCGCATCA CGACCGTGCT GGTGCGCCCG
CTGGCCAGGC CCGCTGAGGA TGACGAGGGG AGCGGCGGCG ATGAGTGA
|
|---|
| Protein sequence | MIAGSTGLLV LAVLLILAAG AFAGVDAALG TVSRARVEAL LRQNKPGAKQ LMMVLGDRPR
HVNLLLLLRL GCELSATVLV TVVSFRLVPV GWAAVLTAGA SMLVVSYVLV GVGPRTLGRQ
HPYAVSLLAA APVRVLGRVL GPLSKLLILV GNAITPGKGF REGPFSSEVE LRELVDMAQE
RGVVDEGERE MIHSVFELGD TIAREVMVPR TEIVWIEQAK SVRQALALSL RTGYTRVPVI
GESVDDIVGV VNLKDLVRIA LSEQPNGKLV SDVMRSPAFI PDTKPVADLL REMQLSRNHL
AVVVDEYGGT AGLLTIEDIL EEIVGEITDE SDTDDRQPVE YLADGAVRVS ARLPVDDLDS
LFGTELDDHE VETVGGLLAQ RLGRVPLPGT EAEIAGLRMR AEGGKDERGR MRITTVLVRP
LARPAEDDEG SGGDE
|
|---|
| |