Gene Amir_1247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1247 
Symbol 
ID8325424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1389680 
End bp1390021 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content73% 
IMG OID644941792 
Producthistidine triad (HIT) protein 
Protein accessionYP_003099045 
Protein GI256375385 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGACT GCCTGTTCTG CAAGATCGCC GACGGCGCCA TCCCCGCCAC CGTCGTGCAC 
CAGACCGACA CCGTCATCGC GTTCCGCGAC ATCGCGCCGC AGGCCCCCGT GCACGTCGTG
CTCGTGGCCA AGCGCCACGA CACCGACGCC GTGGCCCTGG CCAAGGCAGC CCCCGGCGTG
CTCGACGAGC TGTTCCTGGC CGCGGGCGAG ATCGCGGAGG CCGAGGGCGT CGGCGGGTCC
GGCTACCGGC TGCTGTTCAA CACCGGGGCG GACGCGGGGC AGACCGTCTT CCACGCCCAC
CTGCACCTGC TCGGCGGCAC GCGGCTCGGC CCGCTGGCCT GA
 
Protein sequence
MDDCLFCKIA DGAIPATVVH QTDTVIAFRD IAPQAPVHVV LVAKRHDTDA VALAKAAPGV 
LDELFLAAGE IAEAEGVGGS GYRLLFNTGA DAGQTVFHAH LHLLGGTRLG PLA