| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1241 |
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| Symbol | hrcA |
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| ID | 8325418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1383074 |
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| End bp | 1384096 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644941786 |
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| Product | heat-inducible transcription repressor |
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| Protein accession | YP_003099039 |
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| Protein GI | 256375379 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000248464 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGCTG ATCAGCGGCG CTTCGAGGTG TTGCGCGCCA TCGTCGCCGA CTACGTCTCC
AACCACGAGC CGGTCGGGTC CAAGGCGTTG GTCGAGCGGC ACAACCTGGG GGTGTCCAGC
GCGACCGTTC GCAACGACAT GGCCTCGCTG GAGGAGGACG GTTACATCAC CCAGCCGCAC
ACCAGCGCGG GGCGGGTGCC CACGGACAAG GGGTATCGGC TGTTCGTCGA CCGGCTGAGC
GAGGTCAAGC CGTTGTCCAC GGCTGAGCGG CGGGCCATCC ACTCGTTCCT GGAAGGGGCC
TGCGACCTGG ACGACGTGCT GCGGCGCAGT GTTCGGCTGC TCGCGCAGCT CACCCGGCAG
GTCGCCGTGG TGCAGTACCC GACGCTCAGC CGGGCCTCGG TGCGGCACCT CGAGGTGCTG
GCCATCACCC CGGCGCGGCT GATGCTGATC CTGATCACCG ACACCGGTCG GGTGGACCAG
CGGTCGGTCG ACCTGGGTGA CGTCATCACC GAGGACAACG TCGCACGCAT CCGGGCGATG
CTCAACGCCT CGCTGGTCGG CAAGCGGCTC GCGGACGCGT CCGCCGAGGT CGCCCAGCTG
CCCGAGACCG TGCCGAGCGA GCTCCGGGAC ATCGCCACCA GGGTCAGCAC CGTGCTGATC
GAGTCCCTGG TCGAGCACCC CGAGGAGCGC CTGGTGCTGG GTGGCACGGC GAACCTCACC
CGGAACGTGG CAGACTTCCC CGGTTCACTG CGCCCGGTGC TGGAGGCGCT GGAGGAGCAG
GTGGTGGTGC TCAAGCTGCT GGCGGCCTCG CACGACCCCG GCACCGTGCT GGTGCACATC
GGGGAGGAGA ACGAGGCGGC GGAGATGCGC GGCACCTCGG TCGTGTCCAT CGGCTACGGC
AGCGTCGACA AGCTGCTCGG CGGCATGGGC GTCGTCGGAC CAACCCGGAT GGACTACCCG
TCCACGATGG CGGCCGTCAG GGCCGTCGCC CACTACGTGG GGGACATCCT CACCGTCCGG
TGA
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| Protein sequence | MNADQRRFEV LRAIVADYVS NHEPVGSKAL VERHNLGVSS ATVRNDMASL EEDGYITQPH
TSAGRVPTDK GYRLFVDRLS EVKPLSTAER RAIHSFLEGA CDLDDVLRRS VRLLAQLTRQ
VAVVQYPTLS RASVRHLEVL AITPARLMLI LITDTGRVDQ RSVDLGDVIT EDNVARIRAM
LNASLVGKRL ADASAEVAQL PETVPSELRD IATRVSTVLI ESLVEHPEER LVLGGTANLT
RNVADFPGSL RPVLEALEEQ VVVLKLLAAS HDPGTVLVHI GEENEAAEMR GTSVVSIGYG
SVDKLLGGMG VVGPTRMDYP STMAAVRAVA HYVGDILTVR
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