Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1233 |
Symbol | |
ID | 8325410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 1374207 |
End bp | 1374995 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644941778 |
Product | ABC transporter related |
Protein accession | YP_003099031 |
Protein GI | 256375371 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGCCA CGCTCGGCAC CACGGCGCCG CGATCCGGCG TCGACGCGGC CGTCACCCTG ACCGGGGTGC GCAAGGAGTT CGGGACCGGG CAGCACGCCG TGGTCGCCCT CGACGGGGTC GACCTGCAGG TGGCCCCCGG CGAGTTCGTG TGCCTGCTGG GCGCGTCCGG CTGCGGCAAG TCCACGCTGC TGAACCTGGT GGCCGGGCTG GACGCGCCCA CGTCCGGCCG GATCGGGCTG ACCACGTCCA GGCCCGCGGT GATGTTCCAG GAGGCCGCGC TGATGCCGTG GCTGACGGCG GAGCGGAACG TGGAGCTGCC GCTGCGGCTG GCCGGGGTGC GGCGCGGGGA GCGGCGGGCG CGGGCCGGGG AGCTGCTGGA GCTGGTGCGG CTGTCCGGGG TCGGGCGCAA GCGCCCGCAC GAGCTGTCCG GCGGGATGCG GCAGCGGGTG GCGCTGGCTC GGGCGCTGGC GTCCGCCCAG GGCAGCGCCG ACGACGGGGC GCCCGCGCTG CTGCTGATGG ACGAGCCGTT CGCGGCGCTG GACGCCATCA CGCGGGACGT GCTCCAGTCC GAGCTGGCCC GCGTGTGGCG GGAGACCGGC ACGGCGGTGC TGTTCGTGAC GCACGACGTG CGCGAGGCGG TGCGGCTGGG GCAGCGGGTG GTGCTGCTGT CGTCGCGGCC GGGGCGGGTC GTGCGGGAGT GGGCCGTCGA GGGGCGGGAC CCGGCTGAGC TGATCGAGGA CGTCACCGGG CGGCTGCGGG AGGTGATCAG TGGTCACGCG GCGGCCTGA
|
Protein sequence | MTATLGTTAP RSGVDAAVTL TGVRKEFGTG QHAVVALDGV DLQVAPGEFV CLLGASGCGK STLLNLVAGL DAPTSGRIGL TTSRPAVMFQ EAALMPWLTA ERNVELPLRL AGVRRGERRA RAGELLELVR LSGVGRKRPH ELSGGMRQRV ALARALASAQ GSADDGAPAL LLMDEPFAAL DAITRDVLQS ELARVWRETG TAVLFVTHDV REAVRLGQRV VLLSSRPGRV VREWAVEGRD PAELIEDVTG RLREVISGHA AA
|
| |