Gene Amir_1233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1233 
Symbol 
ID8325410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1374207 
End bp1374995 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content77% 
IMG OID644941778 
ProductABC transporter related 
Protein accessionYP_003099031 
Protein GI256375371 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCA CGCTCGGCAC CACGGCGCCG CGATCCGGCG TCGACGCGGC CGTCACCCTG 
ACCGGGGTGC GCAAGGAGTT CGGGACCGGG CAGCACGCCG TGGTCGCCCT CGACGGGGTC
GACCTGCAGG TGGCCCCCGG CGAGTTCGTG TGCCTGCTGG GCGCGTCCGG CTGCGGCAAG
TCCACGCTGC TGAACCTGGT GGCCGGGCTG GACGCGCCCA CGTCCGGCCG GATCGGGCTG
ACCACGTCCA GGCCCGCGGT GATGTTCCAG GAGGCCGCGC TGATGCCGTG GCTGACGGCG
GAGCGGAACG TGGAGCTGCC GCTGCGGCTG GCCGGGGTGC GGCGCGGGGA GCGGCGGGCG
CGGGCCGGGG AGCTGCTGGA GCTGGTGCGG CTGTCCGGGG TCGGGCGCAA GCGCCCGCAC
GAGCTGTCCG GCGGGATGCG GCAGCGGGTG GCGCTGGCTC GGGCGCTGGC GTCCGCCCAG
GGCAGCGCCG ACGACGGGGC GCCCGCGCTG CTGCTGATGG ACGAGCCGTT CGCGGCGCTG
GACGCCATCA CGCGGGACGT GCTCCAGTCC GAGCTGGCCC GCGTGTGGCG GGAGACCGGC
ACGGCGGTGC TGTTCGTGAC GCACGACGTG CGCGAGGCGG TGCGGCTGGG GCAGCGGGTG
GTGCTGCTGT CGTCGCGGCC GGGGCGGGTC GTGCGGGAGT GGGCCGTCGA GGGGCGGGAC
CCGGCTGAGC TGATCGAGGA CGTCACCGGG CGGCTGCGGG AGGTGATCAG TGGTCACGCG
GCGGCCTGA
 
Protein sequence
MTATLGTTAP RSGVDAAVTL TGVRKEFGTG QHAVVALDGV DLQVAPGEFV CLLGASGCGK 
STLLNLVAGL DAPTSGRIGL TTSRPAVMFQ EAALMPWLTA ERNVELPLRL AGVRRGERRA
RAGELLELVR LSGVGRKRPH ELSGGMRQRV ALARALASAQ GSADDGAPAL LLMDEPFAAL
DAITRDVLQS ELARVWRETG TAVLFVTHDV REAVRLGQRV VLLSSRPGRV VREWAVEGRD
PAELIEDVTG RLREVISGHA AA