Gene Amir_1231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1231 
Symbol 
ID8325408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1372542 
End bp1373258 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content81% 
IMG OID644941776 
Productcobalamin (vitamin B12) biosynthesis CbiX protein 
Protein accessionYP_003099029 
Protein GI256375369 
COG category[S] Function unknown 
COG ID[COG2138] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGGTGG CGCACGGGAG CCGGGACCCG AGGTCGGCGG CGGTGGTGAA CGAGCTGCTC 
GGCGTGGTGC GGGCGCTGCG GCCGGAGCTG GACGTGCGGG CGTCGTTCCT GGAGCTGTCC
GCGCCGAGGC TGCCGGACGT GCTGCGGGCG GTCCGCGCGG ACGGCCACCG GGAGGCGGTG
GTGGTGCCGC TGCTGCTGGG GCGGGCGTAC CACGCGCGGG TGGACGTGCC GAGCGCCGTG
GCGGAGGCGG CGGTGCTCGG GCTGGACGTG GCGATCGCGG ACGTGCTGGG CCCGGACCCG
AGGCTGGAGT CGGCGGCCCT GAGGCGGCTG GCCGAGGCCG GGGTCGGCTT CGGGGACCGG
TCGTGGGGCG TGGTGCTCGC GGCGGCGGGG TCCTCGCACG CGCGGGCGAA CGCCGTGGTG
CGCGCGACGG CGCGCCGCTG GGCGGCGGGC GCGGGCTGGG CGGGCGTGGA ACCGGCGTTC
GCGGCGAGCG CCGCGCCGGA CGCGGCCGTG GCGGCGGCCA GGCTGCGCGC GGCGGGCGCG
AGGCGCGTGG CGGTGGCGTC GTGGTTCCTG GCGCCGGGCC TGCTGCCGGA CCGGGTGGCG
GGTCTGGTGG GCGCCGACGC GGTCGTCGCG GCCCCGCTGG GCGCGGACCC GGAGGTGGCG
GAGCTGGTGC TGCACCGGTA CGCGGGAGCG CGGGTGGGGG TGGCGGCGAT CGCCTAG
 
Protein sequence
MAVAHGSRDP RSAAVVNELL GVVRALRPEL DVRASFLELS APRLPDVLRA VRADGHREAV 
VVPLLLGRAY HARVDVPSAV AEAAVLGLDV AIADVLGPDP RLESAALRRL AEAGVGFGDR
SWGVVLAAAG SSHARANAVV RATARRWAAG AGWAGVEPAF AASAAPDAAV AAARLRAAGA
RRVAVASWFL APGLLPDRVA GLVGADAVVA APLGADPEVA ELVLHRYAGA RVGVAAIA