| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1221 |
|---|
| Symbol | |
|---|
| ID | 8325398 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 1364625 |
|---|
| End bp | 1365668 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 644941766 |
|---|
| Product | 2-nitropropane dioxygenase NPD |
|---|
| Protein accession | YP_003099019 |
|---|
| Protein GI | 256375359 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.665213 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTGG AATCGCTCCC GGTCCCGGTG ATCGCCGCCC CGATGGCGGG TGGCCCGTCC
ACCCCCGAGC TCGTCGCCGC GGTGGGCGGC GCGGGCGGGC TCGGCTTCCT CCCGGCGGGC
TACCTGACGC CCGACGCGCT GGCCGACCGC ATCGCCCGCA CCACCGCGCT GTCCACCGCG
CCGTTCGGCG TCAACCTGTT CGTGCCCGGC CCGGACGGCG GCGCCGCCGA GGCGCGGGCC
TACCGGCGGC TGCTGGTCGA CCAGTCGGGC CTCGAACCGG GCGAGCCGCG CTGGGACGAC
GACTCCTACC CGGCCAAGCT GGAGCTCCTC CTGGCGCTGC GCGTCCCGGT GGTCTCGTTC
ACGTTCGGCC TGCCGTCGGC CTCCGACGTC GACCGGCTGC GCGCGGCGGG GACCACCACC
GTCGCCACCG TCACCACCCC CGCCGAGGCC GAGCAGGCCG CGCGGGTCGG CGTCGACGCG
CTGTGCGTGC AGGGCGTCGA CGCCGGTGGC CACCGGGGCA CCTTCGCCGA CGACGGCCGC
AGCCCCGGCG GCGGCGAGCT GCTCGGCCTG CTGACCGCGT TGCGCCTGGT CGGCGCCCGC
GTCTCGCTCC CGCTCATCGC GGCGGGCGGC ATCGCGCACG GCGCGGACGT CGCCGCCGTC
CTCGCCGCCG GGGCGGTCGC CGCGCAGCTC GGCACCGCGT TCCTGGCCTG CCCCGAGGCG
GGCACCGCGC CCGCGCACCG CCAAGCCCTC GCCGAAGGCA CCCGGCGCAC CGCGCTGACC
AGGGCGTTCA GCGGCAGGCC CGCGCGCGGG CTGGTCAACC GGTTCCTCAC CGAGCACACC
CCGCACGCCC CGGCCGCCTA CCCGAGGGTG CACCACCTGA CCAAGCCGAT CCGCGCGTCC
GGCGACCCCG AGCTGATGTC GATGTGGGCC GGGCAGGCGT ACCCCCTGGC CCGTTCGGTC
CCGGCCGCCC AGCTGGTCGC CGACCTGAAC GGGCAGGCCG TCGAGGCCAT CGCGCGGGCC
AACGCGCGGA TTCGCCCGCT CTAG
|
|---|
| Protein sequence | MLLESLPVPV IAAPMAGGPS TPELVAAVGG AGGLGFLPAG YLTPDALADR IARTTALSTA
PFGVNLFVPG PDGGAAEARA YRRLLVDQSG LEPGEPRWDD DSYPAKLELL LALRVPVVSF
TFGLPSASDV DRLRAAGTTT VATVTTPAEA EQAARVGVDA LCVQGVDAGG HRGTFADDGR
SPGGGELLGL LTALRLVGAR VSLPLIAAGG IAHGADVAAV LAAGAVAAQL GTAFLACPEA
GTAPAHRQAL AEGTRRTALT RAFSGRPARG LVNRFLTEHT PHAPAAYPRV HHLTKPIRAS
GDPELMSMWA GQAYPLARSV PAAQLVADLN GQAVEAIARA NARIRPL
|
|---|
| |