| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1186 |
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| Symbol | |
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| ID | 8325363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1325914 |
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| End bp | 1328838 |
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| Gene Length | 2925 bp |
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| Protein Length | 974 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644941731 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_003098984 |
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| Protein GI | 256375324 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAACA CGGACAAGCC CGCCGGCCCC GCCGGCGGGG GTAGCGCCAC ACCCGGACAC
CCGGCGCTCG CCGACCTGCC AGCCAAGCTG CGGGTGCACG CACTGGCGAA GCTGCTCGGC
ACGACCAGCA AGGACGTGCT GGCGGCGCTC GCCGATCTCG GCGAGACGGT GCGCAGCGCC
CAGTCGAGCG TCACCAGGGA TCTCGCGATC AAGGTCGGCG AGAGCCTGCT GAACTGGGAC
GACATCGTCA CCGGCGACGT CGACGAGCTG ACCGTCACCG AGGTGGAGGC GGCTGTGCCC
GCCCGCGAGG TGGCGGCGCT CACACCGCTG TTCGCCCCGC CGTCGGCGAT GTTCCTGCCG
CCGACGCCGG TCGCGACCAC CGCGGTGCCC GTCACCAGGG CGGAGCCCGA GGACGAGGAC
GACGAGGCCG ACGACCAGCA CGCCGACGCG TCCGACGACG CCGACGGCGA TGGTGACGGC
CGTCGCCGCC GCCGTCGTGG CCGTCGCGGT CGCGGTCGCG GCAAGGGTGT GGGCGAGGAC
AGCCAGGACG AGTCGGCCGA GGAGGTCGAG GAGGCCCCGG CCGCCGAGGC CGAGCCGGAG
GCCGACGAGC CCGCCGCCGA CGCGGCCGAC GACGAGGAGG ACGGCGGCGG CAGCCGTCGC
CGCCGCCGCC GTCGCCGCCG CAAGTCCGGC GCCGACGACG AGGCCGCGCC GAACGAGGAC
GACCCGCCGA ACACGGTCGT GCACGTCCGC GAGACCCGCG ACGCGCGTGA CGACCGGGCG
GACTCCGAGG CCGCGCAGAA CGAGGTGCGC AGCGTCCGGG GCTCCACCCG CCTGGAGGCC
AAGCGCCAGC GCCGCAGGGA CGGCCGCGAG GCCGGTCGCC GCCGCGCGCC CGTGCTCTCC
GAGGCCGAGT TCCTGGCCCG CCGCGAGGCC GTCGAGCGCA CCATGGTCGT GCGCGAGCGC
GGCGACCGCA CCCAGATCGG CGTGCTGGAG GACGGCGTCC TCGTCGAGCA CTTCGTGACG
TCCGCGGGCT CCGGCTCGCT GGTCGGCAAC GTCTACCTCG GCCGGGTGCA GAACGTGCTG
CCCAGCATGG AGGCGGCGTT CATCGACATC GGTCGCGGTC GCAACGCGGT GCTCTACGCG
GGCGAGGTCG ACTGGGACGC GGCTGGCCTG GAGGGCAAGG CCCGCAAGAT CGAGCAGGCC
CTGTCCAGCG GCGACAGCGT CCTGGTGCAG GTCACCAAGG ACCCGATCGG CCACAAGGGC
GCCCGCCTGA CCACCCAGAT CAGCCTGCCC GGCCGCTTCC TGGTGTACGT GCCCGGCGGC
GGCGCGACCG GCATCAGCCG CAAGCTGCCG GACAACGAGC GCAAGCGCCT CAAGGACATC
CTCAAGCGCG TCGTCCCCGA CGACGCGGGC GTGATCATCC GCACCGCGTC GGAGGGCGTC
GCCGAGGAGG AGCTGGCGCG CGACGTCACC CGCCTGCAGG CGCAGTGGCA GATCATCAAG
GACAAGGCCG CCACGCCCAA GGCGCAGGCC CCGCAGCTGC TCTACGAAGA GCCGGACCTG
CTGGTCAAGG TCGTGCGCGA CCTGTTCACC GAGGACTTCT CGGGGCTGGT CGTCCAGGGC
TCCGAGGCCT GGGACACGAT CGACGGCTAC GTGCGGCACG TCGCGCCCGA CCTGCAGGAG
CGGCTGCACC GGCACGTCGG CAACTCCGAC GCGTTCGGCG AGTACCGGAT CGACGAGCAG
CTGATGAAGG CGCTGGACCG CAAGGTCTGG CTGCCCTCCG GCGGCTACCT CGTGATCGAC
CGCACCGAGG CCATGACGGT CATCGACGTC AACACCGGGA AGTTCACCGG ATCCGGTGGC
AACCTGGAGG AGACGGTCAC CAGGAACAAC CTGGAGGCGG CCGAGGAGAT CGTGCGGCAG
CTCAGGCTGC GCGACGTCGG CGGCATCATC GTCATCGACT TCATCGACAT GGTGCTGGAG
TCCAACCGGG ACCTGGTGCT GCGCAGGCTC ACCGAGTGCC TCGGCCGGGA CCGGACCAGG
CACCAGGTCG CCGAGGTGAC CTCGCTGGGG CTCGTGCAGA TGACCCGCAA GCGGGTCGGC
ACCGGGCTGC TGGAGGCGTT CAGCAGCACG TGCGAGCACT GCCGGGGTCG CGGGCTGGTC
GTCACGACCG ACCCGACCGC GCACTCGCAC GGCGGTGGCG GCTCGAACGG CGGCGGCTCC
AACGGCGGTT CCACCGGGGG CAACCAGCAG TCGTCCGGCA GCGGTCGGAA GTCGCGGCGC
AACAAGGGCG GCGACTCGGG CGAGCAGCAG GCCGAGGCGC AGGCCGCCCC GGTCGAGCAG
GTCCCCGCGA CCGAGCCCGA GGCGCCCGTC GAGCACGCGG ACGCCCAGGT CGACCACGAC
CTGGAGCCCG AGGTGCAGGA GCGCCGTCCG GGGGGCCGCA GGGCCGCCAG GCAGGCCGCC
CGCGAGGCCG CGAAGGAAGC GGCCAAGCAG GAGGCCGCCG AGCGCGCCGC CGCGAAGCGC
GAGGCCGAGG AGCAGGCCCC GGCCGCCGAG GTCGCCGCTG CGCCGTCGAC CCCGGCGGTC
GCGGAGCCCG AGGCCCCGGT CGTCGCGGCG CGGGCCGTGG CGCCCGAGGT GTTCGCCGAG
GCCCCGGCCG AGCCCGCCGC GGAGGACGCC GAGGCGCCCG CCAAGCGGGG TGGCCGCCAG
CGGCGCCGCG CGGTGCGGCG CGAGGCGGGC GCGGCGGTGA CCAAGGAAGC CGCCCCGGCC
CCCGTGGTCG TGGTGGCCCC GCAGCCCGAG CCGGTCGCGG CGGAGCCCTC CGCCAACGGC
CACGCGCCCG AGGTGAAGGC GGAGTCCCTG GTGACCACCA CGACCCGCCG CAGGGTCTCC
CGGCGCGCGG CGACCCGCCC GGCGGGCCCG CCGAAGGAGA GCTGA
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| Protein sequence | MSNTDKPAGP AGGGSATPGH PALADLPAKL RVHALAKLLG TTSKDVLAAL ADLGETVRSA
QSSVTRDLAI KVGESLLNWD DIVTGDVDEL TVTEVEAAVP AREVAALTPL FAPPSAMFLP
PTPVATTAVP VTRAEPEDED DEADDQHADA SDDADGDGDG RRRRRRGRRG RGRGKGVGED
SQDESAEEVE EAPAAEAEPE ADEPAADAAD DEEDGGGSRR RRRRRRRKSG ADDEAAPNED
DPPNTVVHVR ETRDARDDRA DSEAAQNEVR SVRGSTRLEA KRQRRRDGRE AGRRRAPVLS
EAEFLARREA VERTMVVRER GDRTQIGVLE DGVLVEHFVT SAGSGSLVGN VYLGRVQNVL
PSMEAAFIDI GRGRNAVLYA GEVDWDAAGL EGKARKIEQA LSSGDSVLVQ VTKDPIGHKG
ARLTTQISLP GRFLVYVPGG GATGISRKLP DNERKRLKDI LKRVVPDDAG VIIRTASEGV
AEEELARDVT RLQAQWQIIK DKAATPKAQA PQLLYEEPDL LVKVVRDLFT EDFSGLVVQG
SEAWDTIDGY VRHVAPDLQE RLHRHVGNSD AFGEYRIDEQ LMKALDRKVW LPSGGYLVID
RTEAMTVIDV NTGKFTGSGG NLEETVTRNN LEAAEEIVRQ LRLRDVGGII VIDFIDMVLE
SNRDLVLRRL TECLGRDRTR HQVAEVTSLG LVQMTRKRVG TGLLEAFSST CEHCRGRGLV
VTTDPTAHSH GGGGSNGGGS NGGSTGGNQQ SSGSGRKSRR NKGGDSGEQQ AEAQAAPVEQ
VPATEPEAPV EHADAQVDHD LEPEVQERRP GGRRAARQAA REAAKEAAKQ EAAERAAAKR
EAEEQAPAAE VAAAPSTPAV AEPEAPVVAA RAVAPEVFAE APAEPAAEDA EAPAKRGGRQ
RRRAVRREAG AAVTKEAAPA PVVVVAPQPE PVAAEPSANG HAPEVKAESL VTTTTRRRVS
RRAATRPAGP PKES
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