Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1177 |
Symbol | |
ID | 8325354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1315762 |
End bp | 1316313 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644941724 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003098977 |
Protein GI | 256375317 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.100003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTCAC CGGGCGGAAC GCGGGTGGAG CCCCGGTCGG GCGCCGCCGC GCGGAGCAGG GCCGAGGAGT TGGTGACGAC CCTCTACGCG CAGTTCGAGG GGGTCCTGCT GGCCCACGTG CTCAAGCTGA CCGGCAACGA CCGGCAGTGG GCGGAGGACG TCGTCCAGGA GACCCTCATC CGGGCGTGGC GCAACGCGGA AACGCTGGTC AGCGACCCGA GGATGCTGCG GGGCTGGCTG CTGACGGTGT CCCGCCGGAT CGTGATCGAC GACTGGCGCG GGCGTCGCGC CAGACCCGTG GAGGTGGAGC TGACCGGCGA CGACGTCGCC CTGGAGCCCG ACCGGACCGA GCAGGGGCTG TCCCGCATGG TGCTCGCCGA TCTCATCGGG AAGCTCGGTG CCGAGCACCG GGAAGCGATC TGCGAGACCT ACGTGCGCGG CCGGACCGTC CGCGAGGCGG CGGTCGTGCT GGGCATTCCC GAAGGGACCG TGAAGTCCCG CGTCTACCAC GCCATGAAGA TCCTGCGCCG ATCAATGGAG GAGTCGCGCT GA
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Protein sequence | MNSPGGTRVE PRSGAAARSR AEELVTTLYA QFEGVLLAHV LKLTGNDRQW AEDVVQETLI RAWRNAETLV SDPRMLRGWL LTVSRRIVID DWRGRRARPV EVELTGDDVA LEPDRTEQGL SRMVLADLIG KLGAEHREAI CETYVRGRTV REAAVVLGIP EGTVKSRVYH AMKILRRSME ESR
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