Gene Amir_1176 details

Gene Information

• Locus tag: Amir_1176
• ID: 8325353
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Actinosynnema mirum DSM 43827
• Kingdom: Bacteria
• Replicon accession: NC_013093
• Strand: +
• Start bp: 1313403
• End bp: 1315370
• Gene Length: 1968 bp
• Protein Length: 655 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 644941723
• Product: Radical SAM domain protein
• Protein accession: YP_003098976
• Protein GI: 256375316
• COG category: [C] Energy production and conversion
• COG ID: [COG1032] Fe-S oxidoreductase

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGCGTCG ACTCTGTTTT CCCCTTGCTG GAGCCCCTGC TCCCCAGGGT CTCCAAGCCG 
GTGCAGTACG TCGGCGGGGA GCTGAACGCC ACCACCAAGG ACTGGGACTC CGCCGCGGTG 
CGGTGGGCCC TGATGTACCC GGACGCCTAC GAGGTCGGGC TGCCCAACCA GGGCGTCATG 
ATCCTCTACG AGGTGCTCAA CGAGCAGCCT GACGTCCTGG CCGAGCGCAC CTACGCGGTC 
TGGCCGGACC TGGAAGCGCT CATGCGCGAG CACCGCGTCC CCCAGTTCAC CGTGGACTCC 
CACCGGCCGG TCGGCGCGTT CGACCTGCTC GGCGTCAGCT TCTCGACCGA GCTGGGCTAC 
ACGAACCTGC TCACCGCACT CGACCTGGCG GGCGTGCCCG TGCACGCCGC CGACCGCACC 
GAGGACCACC CGATCGTGGT GGCCGGTGGG CACGCCGCGT TCAACCCCGA GCCGATCTCC 
CGCTTCGTCG ACGCCGCCGT CCTCGGCGAC GGCGAGGAGG CGGTCCTGGA GATCACCGAC 
ATCGTCCGCG CCTGGAAGGC CGAGGGCCGC CCCGGCGGGC GGGACGAGAT CCTGACCAGG 
CTGGCCGAGA CCGGCGGCGT GTACGTGCCC CTGTTCTACG ACGTGGAGTA CCTGCCGGAC 
GGCCGCATCC AGCGCGTCGT GCCCAACCGC GAGCGGGTCC CCTACCGGGT GTTCAAGCGC 
ACCACGATGG ACCTGGACGC CTGGCCGTAC CCGAAGCAGC CGCTGGTGCC GCTCGCCGAG 
AGCGTGCACG AGCGGATGAG CGTGGAGATC TTCCGGGGCT GCACGCGCGG CTGCCGCTTC 
TGCCAGGCGG GCATGATCAC CCGCCCGGTG CGCGAGCGCT CGATCGAGGG CATCGGCGCG 
ATGGTGCAGC GCGGCCTGGC GGCGACCGGC TTCGAGGAGG TCGGCCTGCT CTCGCTCTCC 
AGCGCGGACC ACTCCGAGAT CGCCGAGGTC ACCAAGGGCC TCGCCGACCG GTACGAGGGC 
ACCAACACCA GCCTGTCGCT GCCCAGCACG CGGGTGGACG CCTTCAACAT CGACCTGGCC 
AACGAGCTGT CCCGCAACGG CCGCCGCTCG GGCCTGACCT TCGCCCCCGA GGGCGGCAGC 
GAGCGCATCC GCCGCGTCAT CAACAAGATG GTGTCGGAGG AGGACCTGAT CCGGACGGTC 
AGCGCGGCGT TCGCGGCGGG CTGGCGGCAG GTGAAGCTGT ACTTCATGTG CGGCCTGCCG 
ACCGAGACCG ACGACGACGT GCTGCAGATC GCCGAGATGG CCAAGAACGT CATCCGCGCG 
GGCCGCGAGG CCAGCGGGCG CAAGGACGTG CGCTGCACCA TCTCCATCGG CGGGTTCGTG 
CCCAAGCCGC ACACCCCGTT CCAGTGGGCC GGGCAGTGCG ACCCGGAGAC CGTGGACCGC 
AGGCTGCGCA AGCTGCGCGA GGCGGTCAAC TCGGACCGGA ACCTGGGCCG CAACATCGGG 
ATGCGCTACC ACGACGGGCA GCCGTCGCTG ATCGAGGGAC TGCTCTCGCG CGGCGACCGG 
CGGATCGGCG CGGTCATCGA GCGGGTGTGG CGCGAGGGCG GCCGGTTCGA CGGCTGGTCC 
GAGCACTTCT CCTACGAGCG CTGGGTGCAG GCGGCCAAGA CCGAGCTGGA GCCGGTGGGC 
GTGGACCTGG AGTGGTTCAC CACCCGCGAG CGCGAGGAGC TGGAGGTCCT GCCCTGGGAC 
CACCTGGACT CCGGGCTGGA CAAGGAGTGG CTCTGGGCGG ACTGGCAGGA CGCCCTGGAC 
GAGCGCGAGC AGGACGACTG CCGGTGGACG CCGTGCTTCG ACTGCGGCGT GTGCCCGGCG 
ATGGGCACCG ACATCGAGGT GGGGCCGACC GGGCGGACGC TGCTGCCGAT CTCCCCGGTG 
GGCACCGGCT CGCCGGTGCG CAACCCCGCC CTGACCCACC AGCACTGA 

 

Protein sequence

MSVDSVFPLL EPLLPRVSKP VQYVGGELNA TTKDWDSAAV RWALMYPDAY EVGLPNQGVM 
ILYEVLNEQP DVLAERTYAV WPDLEALMRE HRVPQFTVDS HRPVGAFDLL GVSFSTELGY 
TNLLTALDLA GVPVHAADRT EDHPIVVAGG HAAFNPEPIS RFVDAAVLGD GEEAVLEITD 
IVRAWKAEGR PGGRDEILTR LAETGGVYVP LFYDVEYLPD GRIQRVVPNR ERVPYRVFKR 
TTMDLDAWPY PKQPLVPLAE SVHERMSVEI FRGCTRGCRF CQAGMITRPV RERSIEGIGA 
MVQRGLAATG FEEVGLLSLS SADHSEIAEV TKGLADRYEG TNTSLSLPST RVDAFNIDLA 
NELSRNGRRS GLTFAPEGGS ERIRRVINKM VSEEDLIRTV SAAFAAGWRQ VKLYFMCGLP 
TETDDDVLQI AEMAKNVIRA GREASGRKDV RCTISIGGFV PKPHTPFQWA GQCDPETVDR 
RLRKLREAVN SDRNLGRNIG MRYHDGQPSL IEGLLSRGDR RIGAVIERVW REGGRFDGWS 
EHFSYERWVQ AAKTELEPVG VDLEWFTTRE REELEVLPWD HLDSGLDKEW LWADWQDALD 
EREQDDCRWT PCFDCGVCPA MGTDIEVGPT GRTLLPISPV GTGSPVRNPA LTHQH