Gene Amir_1145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1145 
Symbol 
ID8325320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1275115 
End bp1275600 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content71% 
IMG OID644941691 
Productribose 5-phosphate isomerase 
Protein accessionYP_003098946 
Protein GI256375286 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID[TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR02133] ribose 5-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGACT TCACCGACGT GCGCGTTTAC CTTGGATCGG ACCACGCGGG CTTCGAGCTG 
AAGACCCACC TCGTGCAGTA CCTGACCGAG ACGGGCCACG AGGTCGTCGA CGTCGGCCCG
GCGGTGTACG ACGCCGAGGA CGACTACCCC CCGTTCTGCA TCGAGGCGGC CCGCCGCGTC
GTCGCCGACG AGGGCAGCCT GGGCATCGTG ATCGGCGGCT CCGGCAACGG GGAGCAGATC
GCGGCGAACA AGGTCCCCGG CGCCCGCTGC GCCCTGGCCT ACAACGTCGA GACCGCCCAG
CTCGCCCGCC AGCACAACAA CGCCCAGCTG ATCGGCGTCG GCGGCCGGAT GCACACCACC
GAGGAGGCGA CGGCGATCGT CGAGGCGTTC CTCGCGACCC CGTTCTCCGA GCAGGAGCGG
CACGCCCGGC GCATCGACAT CCTCGCCGAG TACGAGCGCA CCGGTCAGGC CCCGGCCCTG
CCCTGA
 
Protein sequence
MADFTDVRVY LGSDHAGFEL KTHLVQYLTE TGHEVVDVGP AVYDAEDDYP PFCIEAARRV 
VADEGSLGIV IGGSGNGEQI AANKVPGARC ALAYNVETAQ LARQHNNAQL IGVGGRMHTT
EEATAIVEAF LATPFSEQER HARRIDILAE YERTGQAPAL P