Gene Amir_1138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1138 
Symbol 
ID8325313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp1268495 
End bp1269157 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content74% 
IMG OID644941684 
ProductHNH endonuclease 
Protein accessionYP_003098939 
Protein GI256375279 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCCAGACC GACAACCCAC CCCGATCGGC GCCCTGGTGA ACGCCGGGAT CGCGCCGCCG 
GCCCCGTCCG GCCAAAAACA GCCACGTGTG CACGCTGTGG TCGACGGGGA GGGGACGGGC 
TCGGCGGTCA AGCCGATCGT GTTCCCCTGG GGTAGACGCA AGGTGCTGCT GCTCAACACG 
ACCTTCGAGC CCCTGACCGC GCTGCCGCTG CGCCGCGCCG TCGTGCTCGT GGTCTGCGGC 
AAGGCCGAGG TGGTGCACGG GGACCCGGAC GGGACCGTGC TGCACTCCTC GACGGCCGAG 
GTGCTCGTGC CCTCGGTGAT CAGGCTGAGC AACCACGTCC GGGTGCCCTA CCGCGGGCGC 
GTGCCGCTGA CCAGGGCGGG GCTGATGCAC CGCGACCGGT ACCGGTGCGC CTACTGCGGC 
GGGCGGGCCG AGACGATCGA CCACGTCGTG CCGAGGAGCC GGGGCGGCCC CCACACGTGG 
ACCAACTGCG TGGCGTGCTG CGCCAAGTGC AACCACCGCA AGGCCGACAA GCTGCTGTCG 
GAGCTGGGGT GGCGGTTGCG CGTGGTGCCC GCCGCGCCCA GGGGGCCGCA CTGGCGGCTG 
CTGGCCGGGG TCACCGACGC CGACCCCCAG TGGCTCCCCT ACCTGGGGGA GCCCGCGGCC 
TAG
 
Protein sequence
MPDRQPTPIG ALVNAGIAPP APSGQKQPRV HAVVDGEGTG SAVKPIVFPW GRRKVLLLNT 
TFEPLTALPL RRAVVLVVCG KAEVVHGDPD GTVLHSSTAE VLVPSVIRLS NHVRVPYRGR 
VPLTRAGLMH RDRYRCAYCG GRAETIDHVV PRSRGGPHTW TNCVACCAKC NHRKADKLLS 
ELGWRLRVVP AAPRGPHWRL LAGVTDADPQ WLPYLGEPAA