| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1134 |
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| Symbol | |
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| ID | 8325309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1263090 |
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| End bp | 1264685 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644941680 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003098935 |
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| Protein GI | 256375275 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.746257 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGACGTT CCTCCGACCT CAGCCCCGAG CAGGCCGACG AGTCAGCCTG GTGGCACGAC
GCCGTCTTCT ACCAGGTCTA CGTCCGCTCG TTCGCCGACT CGAACGGCGA CGGGGTCGGT
GATCTGGACG GCATCCGCTC CCGGCTCGGC TACCTCGAAC TGCTGGGCGT CGACGCCCTG
TGGCTCACGC CGTTCTACAC CTCCCCGATG GCCGACCACG GCTACGACGT CGCGGACCCG
CGCGACGTCG ACCCGCTGTT CGGCGACCTG GCCGCGTTCG ACCGGCTGGT CGCCGAGGCC
CACGAGCACA ACATGAAGAT CACCGTCGAC CTGGTGCCGA ACCACAGCAG CGACCGGCAC
GAGTGGTTCC AGGCCGCGCT GCTGGCCGCG CCGGGCGGTC CCGAGCGGAA CCGCTACATC
TTCCGGGACG GGCGCGGCTT CGACGGGTCG CAGCCGCCGA ACAACTGGAC CAGCATCTTC
GGCGGCCCGG CGTGGACGCG GGTCGCGGAC GGGCAGTGGT ACCTGCACCT GTTCGCGCCC
GAGCAGCCGG ACCTGAACTG GGACAACCCG GAGGTGTCCG CCGACCTGGC GCGGACCCTG
CGGTTCTGGC TGGACCGGGG CGTCGACGGG TTCCGGATCG ACGTCGCGCA CGGCATGGCC
AAGCCGCACG GCCTGCCGGA CATGGACGTG CGCGCCGAGC AGGCGTCCGG CGTGCTGCAC
GACAACGCGC TCGACCCGAG GTTCGACGAC GACGGCGTGC ACGAGCACCA CCGGATGATC
CGGAAGGTGA TCGACTCCTA CCCCGGCCGG ATGGCCGTGG GTGAGATCTG GGTGCAGGGC
GACGACCGGT TCGCCCGCTA CGTGCGGCCG GACGAGCTGC ACCTGGGCTT CAACTTCCGC
CTGGTGCAGG CCGGGTTCGA GGCCGAGCAG GTGCGCGCGG CGATCGAGCA CTCGCTGGCC
GCCGTGGCGC CGACCGGCAC CCCGCCGACC TGGACGCTGT CCAACCACGA CGTGGTGCGG
CACGTGACCC GGTACGGGGG CGGCGCGCTG GGCGCGCAGC GGGCGCGGGC GATGGCGCTG
GTGCAGCTGG CGCTGCCGGG CGTGGTCTAC CTGTACAACG GCGAGGAGCT GGGCCTGCCG
AACGTGGAGC TGCCGGACTG GGCGCTCCAG GACCCGACGT GGGTCCGCTC CGGGCACACC
GACCGGGGCC GCGACGGCTG CCGCGTGCCG CTGCCGTGGG AGGGCTCGGC CCCGCCGTTC
GGGTTCTCCT CCGGGCAGGG GTCGTGGCTG CCGCAGCCGG ACGAGTGGGC CGGGCTGACC
GCCGAGCGGC AGCTGGAGGA CCCGGACTCG ATGCTGTCGC TGTACCGGCA GGCGCTGGAG
CTGCGGAAGT CCACCGAGGG CATGTCCGGG ACCGAGCTGG AGTGGTACGG GGCGCCCCCC
GGCTGCTTCG CGTTCCGCCG CAAGGGCGGG GGGCTGATCT GCGCCCTGAA CACCTCGGGC
GCGCCGGTGC CGCTGCCCCC TGGCGAGGTC CTGCTCTCCA GCGGGCCGAT GGACGGCGAC
CAGCTGCCGC CGGACACCGC GGTGTGGCTG GTCTGA
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| Protein sequence | MRRSSDLSPE QADESAWWHD AVFYQVYVRS FADSNGDGVG DLDGIRSRLG YLELLGVDAL
WLTPFYTSPM ADHGYDVADP RDVDPLFGDL AAFDRLVAEA HEHNMKITVD LVPNHSSDRH
EWFQAALLAA PGGPERNRYI FRDGRGFDGS QPPNNWTSIF GGPAWTRVAD GQWYLHLFAP
EQPDLNWDNP EVSADLARTL RFWLDRGVDG FRIDVAHGMA KPHGLPDMDV RAEQASGVLH
DNALDPRFDD DGVHEHHRMI RKVIDSYPGR MAVGEIWVQG DDRFARYVRP DELHLGFNFR
LVQAGFEAEQ VRAAIEHSLA AVAPTGTPPT WTLSNHDVVR HVTRYGGGAL GAQRARAMAL
VQLALPGVVY LYNGEELGLP NVELPDWALQ DPTWVRSGHT DRGRDGCRVP LPWEGSAPPF
GFSSGQGSWL PQPDEWAGLT AERQLEDPDS MLSLYRQALE LRKSTEGMSG TELEWYGAPP
GCFAFRRKGG GLICALNTSG APVPLPPGEV LLSSGPMDGD QLPPDTAVWL V
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