Gene Amir_1126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1126 
Symbol 
ID8325301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1246020 
End bp1246544 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content74% 
IMG OID644941672 
Productsingle-strand binding protein 
Protein accessionYP_003098927 
Protein GI256375267 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCGGTCA ACGAGACGAG GGTGACCCTG GTGGGCACGG TGGCCAGCGA GGTGGCGCTG 
AGCACGGTCG GCACGGGGTT CAGCCGGGCG GTGTTCCGGA TGGTCAGCGT GGAGCGGCGG
TTCGACCGGG ACCTGGGGCG GTTCGTGGAC GGTGACCGGT TGTTCGTGTC GGTGACCTGC
TGGCGGGGGC TCGCGGAGAA CGTGCGGGCG AGCCTGGGGC GGGGCGACCC GGTGGTGGTG
ACGGGCAAGC TGCGGCTGCA CGAGCTGCGC ACCGAGGACG TGCGGCGCAC CCACCTGTCG
GTGGAGGCGT CGGCGGTGGG GCCGAACCTG CTGTGGTGCA CGGCCGAGCC CCGGCGGGGC
GGTGATCCCG GTCCCGATCC CGGTTCCGAA CCGGTTTCCG GCGTGGCCGG GCGCGGTATT
TCAGAGTCGG CGGGTGCAGC GCCTACGCTG CCCGACGTGC TCGCGCCGCG CACCGAGGAG
CAGTCGGTCT CCGTCGCGGA GGAGGCCCTC CCGGTGCCCT TCTGA
 
Protein sequence
MAVNETRVTL VGTVASEVAL STVGTGFSRA VFRMVSVERR FDRDLGRFVD GDRLFVSVTC 
WRGLAENVRA SLGRGDPVVV TGKLRLHELR TEDVRRTHLS VEASAVGPNL LWCTAEPRRG
GDPGPDPGSE PVSGVAGRGI SESAGAAPTL PDVLAPRTEE QSVSVAEEAL PVPF