Gene Amir_1125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1125 
Symbol 
ID8325300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1245171 
End bp1245803 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content71% 
IMG OID644941671 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003098926 
Protein GI256375266 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGAGG AGACCACGCC CAAGCGCAGA CGAGCACCGG CGATGAGCCA GGAGGAGCGC 
AGGGACGCGA TCGTCCAGGC GACGCTCCCC CTGCTCGAAC TGCACGGCGC CAACGTCACC
ACCAGCCAGA TCGCCCAGGC GGCAGGCATC GCCGAGGGCA CGGTCTTCCG GGCGTTCAAG
GACAAGCAGG AGCTGATCCA CGCCTGCGTC CACGAGGCGC TGTCCCCCGA ACCGGTGATC
GACCTGCTCG ACCGGACCGC GAGCCTCCCG GACCTCCGGG ACCGCGCGAT CTGGACGATC
AACGCCCTCT CCAGCTACCT GGAGCGGATG TGGTCGCTGG CCGGGGTCCT GCGCGAGAGC
GGGTTCGACC CGCACGACAA GAGCGGCGGC AAGCACAAGA ACCCCGGCGA GCACTTCGAG
CGGCTGCACA GCAGGGCCGC CGCCGTGTTC GAGCCGGACG CCGACCGCCT CGCCGTCGAG
CCCGCGCTCG CCGCGAAGCT CCTGCTCGGC CTGGTCATGG CCAACCGGGC CCGCCCCGGC
GCGCCCACCA CCGGGGCGGA CGCCTCACCG GAGCAGCTCG TCGATCTCTT CCTGCACGGT
GCGCTGAGGG GGACCCGATG CACGACCTCA TGA
 
Protein sequence
MPEETTPKRR RAPAMSQEER RDAIVQATLP LLELHGANVT TSQIAQAAGI AEGTVFRAFK 
DKQELIHACV HEALSPEPVI DLLDRTASLP DLRDRAIWTI NALSSYLERM WSLAGVLRES
GFDPHDKSGG KHKNPGEHFE RLHSRAAAVF EPDADRLAVE PALAAKLLLG LVMANRARPG
APTTGADASP EQLVDLFLHG ALRGTRCTTS