Gene Amir_1118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1118 
Symbol 
ID8325292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1236951 
End bp1238105 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content71% 
IMG OID644941663 
Productintegrase family protein 
Protein accessionYP_003098919 
Protein GI256375259 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.868732 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGCC CTCGGCTGCC GGTGGGCACT CACGGCGAGA TCAGGTGCTA CCGCCTGCCC 
AACGGCAGGT ACCGGGCCAT CACGAACTAC CGCGACTACG ACGGGGTGTT GCGCCCGGTG
GAGCGGGTGG GAGGCACGGA GACGAACGCC AAGAACAACC TCCGAGCCGC CCTCCGGGAC
CGGGCCCGCG CCGTGGTGGG GGAGGAGGTC ACCGACCGGG CCAAGGTGGC TGCGGTCGCG
GACATGTGGC TGCGGGAGCT GGACGAGTCC GGGAAGGCGA CGCGGACCAA GCGCACCTAC
CGGGAGTCCT GGACGCGGGA CCTGGCCGAA CCGGTCGGGG AGCTGACCGT CCGAGAGTTC
ACCGTGGCCA CCGCAGAGCG AATTCTCAGG GCCGTGCGGG ACGGAGCGGG GTTGGGCAGT
GCCAAGCACG CCAAGGTGGT CCTGACCGGG GTCTTGGGGC TCGCGGTGCG TTACGACGCG
ATCGAGTCCA ACCCGCTGCG CGAAGTGGGG GAGCTGGGCA AGAGCAAGAA GGCCAAGCCC
GTCGCCAAGA GGCTCACCGA GATCACCTGG GCCCAGTACG TGAGCCTGCG GGCGGTGCTG
GTGGCGGCCG ACGCGGGGGA GCGGGCCGAC CTCGTGGACC TGGTCGACGT CCTCGCGGCG
ACCGGTGCCC GGATCGGCGA GCTGCTGGCC CTGGGCTGGG CGCGGGTGGA CACCGGCGCG
GGGACCTTCA AGCTGGAAGG CGCCGTGATC CGGGAGAAGG GGATTGGCCT GCTGGTCCAG
CCGCACACCA AGTCGGCGGC GGGCATGAGG ACGATCGAGG TGCCCTCGTG GGCGGTTGAG
ATCGTGGCCA AGCGGCAGGC TGAGGCGGAC AGCGAGTGGG TGTTCCCCAC CGCCCTGGGT
GGACTTCGGG ACCCGGACAA CACCCGCAAG AGCCTGCGGC GGGTACTGGC GGGCACCGAG
TGGGAAGGGC TGCACCCGCA CGCCTTCAGG CACCTGGTCG CGACCCGGTT GGATGAGGCG
GGGCTGACGG CCCGGCAGAT CGCCGACTAC CTCGGGCACG CGCAGGTCAG CATGACCCAG
GACGTGCACA TGAACCGCAA GGTGGTCGGC GGGGCGGCTG CCGCAGCCCT GGAAGGTCTG
GACCCCACGA AGTGA
 
Protein sequence
MARPRLPVGT HGEIRCYRLP NGRYRAITNY RDYDGVLRPV ERVGGTETNA KNNLRAALRD 
RARAVVGEEV TDRAKVAAVA DMWLRELDES GKATRTKRTY RESWTRDLAE PVGELTVREF
TVATAERILR AVRDGAGLGS AKHAKVVLTG VLGLAVRYDA IESNPLREVG ELGKSKKAKP
VAKRLTEITW AQYVSLRAVL VAADAGERAD LVDLVDVLAA TGARIGELLA LGWARVDTGA
GTFKLEGAVI REKGIGLLVQ PHTKSAAGMR TIEVPSWAVE IVAKRQAEAD SEWVFPTALG
GLRDPDNTRK SLRRVLAGTE WEGLHPHAFR HLVATRLDEA GLTARQIADY LGHAQVSMTQ
DVHMNRKVVG GAAAAALEGL DPTK