Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1118 |
Symbol | |
ID | 8325292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1236951 |
End bp | 1238105 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644941663 |
Product | integrase family protein |
Protein accession | YP_003098919 |
Protein GI | 256375259 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.868732 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCGCC CTCGGCTGCC GGTGGGCACT CACGGCGAGA TCAGGTGCTA CCGCCTGCCC AACGGCAGGT ACCGGGCCAT CACGAACTAC CGCGACTACG ACGGGGTGTT GCGCCCGGTG GAGCGGGTGG GAGGCACGGA GACGAACGCC AAGAACAACC TCCGAGCCGC CCTCCGGGAC CGGGCCCGCG CCGTGGTGGG GGAGGAGGTC ACCGACCGGG CCAAGGTGGC TGCGGTCGCG GACATGTGGC TGCGGGAGCT GGACGAGTCC GGGAAGGCGA CGCGGACCAA GCGCACCTAC CGGGAGTCCT GGACGCGGGA CCTGGCCGAA CCGGTCGGGG AGCTGACCGT CCGAGAGTTC ACCGTGGCCA CCGCAGAGCG AATTCTCAGG GCCGTGCGGG ACGGAGCGGG GTTGGGCAGT GCCAAGCACG CCAAGGTGGT CCTGACCGGG GTCTTGGGGC TCGCGGTGCG TTACGACGCG ATCGAGTCCA ACCCGCTGCG CGAAGTGGGG GAGCTGGGCA AGAGCAAGAA GGCCAAGCCC GTCGCCAAGA GGCTCACCGA GATCACCTGG GCCCAGTACG TGAGCCTGCG GGCGGTGCTG GTGGCGGCCG ACGCGGGGGA GCGGGCCGAC CTCGTGGACC TGGTCGACGT CCTCGCGGCG ACCGGTGCCC GGATCGGCGA GCTGCTGGCC CTGGGCTGGG CGCGGGTGGA CACCGGCGCG GGGACCTTCA AGCTGGAAGG CGCCGTGATC CGGGAGAAGG GGATTGGCCT GCTGGTCCAG CCGCACACCA AGTCGGCGGC GGGCATGAGG ACGATCGAGG TGCCCTCGTG GGCGGTTGAG ATCGTGGCCA AGCGGCAGGC TGAGGCGGAC AGCGAGTGGG TGTTCCCCAC CGCCCTGGGT GGACTTCGGG ACCCGGACAA CACCCGCAAG AGCCTGCGGC GGGTACTGGC GGGCACCGAG TGGGAAGGGC TGCACCCGCA CGCCTTCAGG CACCTGGTCG CGACCCGGTT GGATGAGGCG GGGCTGACGG CCCGGCAGAT CGCCGACTAC CTCGGGCACG CGCAGGTCAG CATGACCCAG GACGTGCACA TGAACCGCAA GGTGGTCGGC GGGGCGGCTG CCGCAGCCCT GGAAGGTCTG GACCCCACGA AGTGA
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Protein sequence | MARPRLPVGT HGEIRCYRLP NGRYRAITNY RDYDGVLRPV ERVGGTETNA KNNLRAALRD RARAVVGEEV TDRAKVAAVA DMWLRELDES GKATRTKRTY RESWTRDLAE PVGELTVREF TVATAERILR AVRDGAGLGS AKHAKVVLTG VLGLAVRYDA IESNPLREVG ELGKSKKAKP VAKRLTEITW AQYVSLRAVL VAADAGERAD LVDLVDVLAA TGARIGELLA LGWARVDTGA GTFKLEGAVI REKGIGLLVQ PHTKSAAGMR TIEVPSWAVE IVAKRQAEAD SEWVFPTALG GLRDPDNTRK SLRRVLAGTE WEGLHPHAFR HLVATRLDEA GLTARQIADY LGHAQVSMTQ DVHMNRKVVG GAAAAALEGL DPTK
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