Gene Amir_1102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1102 
Symbol 
ID8325276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1225890 
End bp1227101 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content69% 
IMG OID644941648 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003098904 
Protein GI256375244 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCTC CCCTGTCCGA GAACCTGGCC CGCTTCCGCA AGGCCCGCAA CCTCTCCCAG 
GAGGAATTGG CCGTAGCCGC GTCGGTCGGA GTGGACACCG TGGGGCGGAT CGAGCGCGGG
GAGCGCAGCA CCACCCGTCC CAGCACGATC GTCAAACTGG CCCGAGCGCT CGGCGTGTCC
GCCGACTCCC TGTTGGGCTT GCCCGTCCTC AGCCGTACCG CTCAGCACCA CCAGGTGGCC
GAGCTTCGCC ACGCGATCAC CGCGAGCGCG GACATCCCAG GCTTGGACGA CTTCACCGAC
ACGGACGAGG TCGCCGACAT AACGACCTTG TCCACCACGG CTCACCGAGC CTGGCGGGCC
TACGTCGACG GCCGCCACAC CGAACTGATG CACACCCTGC CCATCCTGCT GGTGGACGCC
CGCCGCCTGG TCCATGCCAG CACTGGAGAT CAGAAGGCCG CAGCCCACTG CCTGCTATCC
ACGTCCTACC GCTTGGGCGC CGGTATGGCG GGCCGCCTGG ACCTGGACGA CCTGGCCTGG
ACGTCAGCGG AACGAGCCCT GAACGCCGCT CGCCACTCGG ACGCGGTGGA GATGGAAACC
GCGATCTCCC TGCGCTACCT GGTGTGGACC CTGGTCCGCC AAGGTCGAGT CGCCGACGCC
GAGCACGTGG CCGCCAAGGC CGCTGAGCAG ATCGAACCGC GGATGCTGGA CCGAGACCCG
AACCGAGCCG GGATCTTCGG CAACCTCATC TTCAACGCGG CCAGCGCCGC CCTGCGTTCA
GGCAGCACAG GCCGAGCCGA AGACCTCTTG GCCGTGGCCC AGTCCGCAGC GGTGAGGGCA
GGCCAGGACA CCGCAAGCGA AAGCGCTATC TTCGGCCCCC GAGTAGCGGC CTTCCAAGTA
GTCGACCTGG CAATGCGCTT GGGCGATCCG GAAACAGCCC TGCACCTGGC AACCCAAGTC
CCGGAGGCAC GGGGCACAGT GCCCGCCTTC TGGGAGTCAG GCCACCGCCT GCACCTGGCC
CACGCCGCCG CTCAACTACG TCGGGACCAA CTCTCCCTGC GCTACCTGAC CGAGGCCCGC
GACCTAGCCC CAGACTGGGC CGCCGCTCAA CCGCTCGGTG CCACCACGAT GCGCTTGCTG
CTGGACCGAG CAACCCGACG CCGAGGTGCT GCTTTCGCCG CCCTGGCAGC CCACTACGGC
ATCGCCCCGT AG
 
Protein sequence
MTAPLSENLA RFRKARNLSQ EELAVAASVG VDTVGRIERG ERSTTRPSTI VKLARALGVS 
ADSLLGLPVL SRTAQHHQVA ELRHAITASA DIPGLDDFTD TDEVADITTL STTAHRAWRA
YVDGRHTELM HTLPILLVDA RRLVHASTGD QKAAAHCLLS TSYRLGAGMA GRLDLDDLAW
TSAERALNAA RHSDAVEMET AISLRYLVWT LVRQGRVADA EHVAAKAAEQ IEPRMLDRDP
NRAGIFGNLI FNAASAALRS GSTGRAEDLL AVAQSAAVRA GQDTASESAI FGPRVAAFQV
VDLAMRLGDP ETALHLATQV PEARGTVPAF WESGHRLHLA HAAAQLRRDQ LSLRYLTEAR
DLAPDWAAAQ PLGATTMRLL LDRATRRRGA AFAALAAHYG IAP