| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1096 |
|---|
| Symbol | |
|---|
| ID | 8325270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 1218379 |
|---|
| End bp | 1219956 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 644941642 |
|---|
| Product | Amidohydrolase 3 |
|---|
| Protein accession | YP_003098898 |
|---|
| Protein GI | 256375238 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCCTTG ACGTGAAGTT GGTGCGCGGA CGGGTCGTGA CGCTGGACCC CGCCGGGACC
TGTTCGGACG TGGTGGGCGT GTGGCGCGGG CGCGTGGTCG GGGTGGGCGA CCAGGTCCGC
GACCTGCCCG CCAGGCGCGT GGTCGACCTG GACGGCGCGG TGGTGCTGCC GGGTTTCGTG
GACGCCCACA CCCACCTGGC GTGGACCGGC CGAGCGGCCC GGATGCCGGA CGTTTCGGGA
TGCCGCACCG TCACCGAGGT CGTGGCCCTC CTGGCGGCCC ACCGGACCGA GGCCAGGCTG
GAGGCGGCCG GCTACGACCA CCGTCTCCTG GACCGCCCGC TCACCGCGCG CGACCTGGAC
GCGGTGGGCG GGCGCGTCTA CCTGCAGGAC GTGTCGGGCC ACGCCTGCGT GGTCGACTCC
GGCACGCTGG CCGAGCTGCC CGCGCACGCC CTGACCGACG CCGAGCGCGA CGCCGAGGGC
GCCCTGACCG GGTTCCTCGC CGAGGGCGCC CAGAGCGCCG CCCGAGCCCT GCTGCTCCCG
TACCCGCTGT CCAACGTGAT CGCCGACGTG GAGGCGGGCG CCGGGCAGTG CCTGTCCGAG
GGCGTGGTCC TGGCCGCGGA AGCAGGCGTG GCCGGCGGCC TGATCGGCGC CACTCCGCTG
GAGGTGGCCG CCTACCAGCA AGCCACCCTG CCCATCCGGG TCCAACTCAT GGTCGCCGCG
GACCAGCTCC GCCCAGCGGC AGGCCACCCG TCCGACAACA TCGACCGCGC CGTCCAGTTG
GGCCTGCGCA CCGGCCTTGG CGACGACCGC CTGTCCATCG GCGCCCTGAA GGTCTTCACC
GACGGCGGCA TGATCGCCAG AACCGCGGCC CTGACCGAGC CCTACGAAGG CACCACCAAC
ACCGGCCAGC TCCAAGACGA CCCGGACCGG ATGCGGTCCT GGATCCAGGA CGGCCACCGC
GCGGGCTGGC AACTGGCCGT CCACGCCATC GGCGACCGCG CGGTCGACTT CGCCCTGGAC
GCCCTGGAAT CGGCCCTGAC CGACCACCCC AGGCCCGACC ACCGCCACCG GATCGAGCAC
TGCGGCCTGG TCCGCCCCGA CCAGCTGGGC AGGATCGCCG CCCTAGGCGT GATCCCGGTG
GTCCAACCCA CTTTCCTGTG GGCGTACGGC GACGACTACG CCAAGATCAC CGGCCCCCGA
GCCCCGTGGA TGTACCGAGG CCGCTCCTTC CTGGACCACA ACATCCCCCT GGCGGGCAGC
TCGGACCGCC CGGTGGCCGA CGGCAACCCG CTGCGGGCCG TCCAATTCCT GGTGGAACGC
CAATCCCGCA CCGGCCAGCC GATCGGCCCG GACGAGGCCC TGACCGTCGA GCAGGCCCTG
CGCGCGCACA CCGCGGGCGC GGCCTACGCG TGCAGACGCG ACCACGACCT GGGCACGATC
GAGGAGGGCA AACTGGCCGA CTTCGCCATC CTCGAAGACG ACCCACGCGC AGTCGCCCCC
ACCCGCATCG CCACCATCCC CCTGGCGGCA ACGGTCGTGA ACGGCGAATT CGCCCACGAC
CCGGCAGGCC TGACCTGA
|
|---|
| Protein sequence | MILDVKLVRG RVVTLDPAGT CSDVVGVWRG RVVGVGDQVR DLPARRVVDL DGAVVLPGFV
DAHTHLAWTG RAARMPDVSG CRTVTEVVAL LAAHRTEARL EAAGYDHRLL DRPLTARDLD
AVGGRVYLQD VSGHACVVDS GTLAELPAHA LTDAERDAEG ALTGFLAEGA QSAARALLLP
YPLSNVIADV EAGAGQCLSE GVVLAAEAGV AGGLIGATPL EVAAYQQATL PIRVQLMVAA
DQLRPAAGHP SDNIDRAVQL GLRTGLGDDR LSIGALKVFT DGGMIARTAA LTEPYEGTTN
TGQLQDDPDR MRSWIQDGHR AGWQLAVHAI GDRAVDFALD ALESALTDHP RPDHRHRIEH
CGLVRPDQLG RIAALGVIPV VQPTFLWAYG DDYAKITGPR APWMYRGRSF LDHNIPLAGS
SDRPVADGNP LRAVQFLVER QSRTGQPIGP DEALTVEQAL RAHTAGAAYA CRRDHDLGTI
EEGKLADFAI LEDDPRAVAP TRIATIPLAA TVVNGEFAHD PAGLT
|
|---|
| |