| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1088 |
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| Symbol | |
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| ID | 8325262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1208870 |
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| End bp | 1210285 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644941634 |
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| Product | putative phytochrome sensor protein |
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| Protein accession | YP_003098890 |
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| Protein GI | 256375230 |
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| COG category | [K] Transcription
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGGTG ACCCCCTTCT GCTCGCGCGC GAGCACGAGG CGGCGCTGGC CGGTGGTCCC
GCCCCCGGCA CGCGGCCGGT GATCCTGGAG TCGTGGCGGC GCTCGCTGGC GGCCCGCGTC
GACCCGGACA GCCGCGAGGC CCCGCTGGTG CTGGACCGGG ACGAGGTGGT GGACCTGCGG
GCCGCGCACC CGCTGGCGCA GGCGCTGCCG GTGCTGCGGG AGACGCTGGT GAGCATCGCG
GACGACGCCG AGCACGTCAT GATCATCACG GACGCGGACG GCCGGGTGCT GTGGTGCGAG
GGCTCGGCGC GGGTGCGCGG GGTCGCCGAG CGGGTGCGCC TGACCGAGGG CGCCCGGTGG
AGCGAGGACG CGATCGGCAC CAACGCGATG GGACTGGCGC TGGCCACCGG CGGCCCGGTG
ACCGTGCACT CGGCGGAGCA CCTGGTGCGC ACCTGCCACG GCTGGACCTG CGCGGCGAGC
CCGGTGACGG ACCCGGACAG CGGGCGCACC CTGGGCGTGG TGGACGTGAG CGGGCCGCTG
ACCAGCCTGC ACCCGGCGAT GCCCGCGCTG GTGTCGGCGG CGGCGCGGCT GGCCGAGGGG
CACCTGCGGA CCAGGCTCGC CGAGCGCGAC GAGCGGCTGC GGTCGGCGAA CATGCGGCAC
CTGCTGGCGC TGCGCGGCGG TCCTGGCGCG CTGCTGAGCC AGACCGGCCG GGTGCTGGCC
GCCGAACCGG GCACCGAGCT GAGCGGCCGG GTCGACGTCG GCCGGGACCG GGTGCGGCTG
GCCGACGGGC GCACCGGGGT GCTGGAGCCG CTGGACGAGG GCTACCTGCT GCGGGTGGAG
CGGGGCGCGC GGCGCAGGCC GGTGCTGTCG CTGCGCTTCC TCGGCGAGCC GACCGCGGCC
CTGGACGGCG ACGAGGTCGC GCTGACCCTG CGGCACGCGG AGGTGCTGGT CGCGCTGGCG
CTGCACCCGC GCGGGCTCAC CGCCGACCAG CTGGCGCTGC GGCTGTACGG GGAGCGCGGC
AACCCGGTGA CCGTGCGCGC GGAGCTGCAC CGGCTGCGGG CGCAGCTCGG CGGGGTGCTG
CTGACCAGGC CGTACCGGTT GGACGCCGAG GTGCGCGGGG ACTTCCTGGC GGTGCGGGCG
GCGCTGCGCT CGGGTGACGT GACCGCCGCG GCCTCCGGGT ACGGGGACGA GCTGCTGCCG
CGCTCGGACG CGCCGGTGGT GCGGGCGGAG CGGGAGGACC TGGCGGCGGC GGTGCGGCGG
ACCGTCCTGG ACCGGGGCGA CGCGGAGGCG CTGTGGCGGT TCGCCCGCGA CGAGGACGCC
GAGGCGCTGG ACCGGCTGGC CAGGCTGCTG CCCAGGGCAG ACCCGAGGCG GGAGCTGGTG
GTGTCGCGGC TGCGGCGGGT GCTCGCCGAG GCGTGA
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| Protein sequence | MRGDPLLLAR EHEAALAGGP APGTRPVILE SWRRSLAARV DPDSREAPLV LDRDEVVDLR
AAHPLAQALP VLRETLVSIA DDAEHVMIIT DADGRVLWCE GSARVRGVAE RVRLTEGARW
SEDAIGTNAM GLALATGGPV TVHSAEHLVR TCHGWTCAAS PVTDPDSGRT LGVVDVSGPL
TSLHPAMPAL VSAAARLAEG HLRTRLAERD ERLRSANMRH LLALRGGPGA LLSQTGRVLA
AEPGTELSGR VDVGRDRVRL ADGRTGVLEP LDEGYLLRVE RGARRRPVLS LRFLGEPTAA
LDGDEVALTL RHAEVLVALA LHPRGLTADQ LALRLYGERG NPVTVRAELH RLRAQLGGVL
LTRPYRLDAE VRGDFLAVRA ALRSGDVTAA ASGYGDELLP RSDAPVVRAE REDLAAAVRR
TVLDRGDAEA LWRFARDEDA EALDRLARLL PRADPRRELV VSRLRRVLAE A
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