Gene Amir_1074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1074 
Symbol 
ID8325248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1192627 
End bp1193808 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content75% 
IMG OID644941620 
ProductLactate 2-monooxygenase 
Protein accessionYP_003098876 
Protein GI256375216 
COG category[C] Energy production and conversion 
COG ID[COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTGCTC AGTTCGCCGC CTACCAGAAC GAGATCTACC TCCAAGGTCT GGCGGGCACC 
GTGCCGCCGT TCACCACCGA CCCCGAGGGC CTCGCCGAGT CGGCCCGGCA GCGGCTCGGG
CCCGGTCCCT ACTGGTACGT CGCCGGGGCC GCCGGGAGCG GGGCCACGGC CCGCGCCAAC
CGGGAGGCGT TCGACGGGTG GCGGATCGTG CCCCGGATGC TCACCGGCGC CAGCCAGCGG
CACCTCGGGG TCACCGTGCT CGGCACCGAG ATGCCCGCGC CCGTGCTGCT CGCCCCGATC
GGCGTCCAGT CGATCCTGCA CCCGGACGGC GAGCTGGCCA CCGCGCGCGC CGCCGCCGAG
CTGGGCGTGC CGTTCGTGCT GTCCACCGCC TCCTCGCACA CCGTCGAGGA GGTCGCCGAG
GCCGCCGGTG ACGGGCCGCG CTGGTTCCAG CTCTACCGCC CCAACGAGCC CGAGGTGTGC
GCCAGCATCC TCGACCGCGC CCGCAAGGCC GGGTTCAGCA CCCTCGTGGT CACCCTGGAC
ACCTGGACCC TCGCCTGGCG CCCGCACGAC CTCGACCACG CCTACCTGCC GTTCATCCGC
GGCATCGGCA CCGCCACCCC GTTCAGCGAC CCGGTGTTCC GCGCCGGCCT GAGCGCCCCG
CCCGAGGAGG ACCTGACCGA GGCCGTGCTG CGCTGGGTGC AGATGTTCAC CGGCACCGAC
CACCGCTGGG AGGACCTGCC GTTCCTGCGC GAGCACTGGG ACGGCCCGAT CGTCCTCAAG
GGGGTCCTGC ACCCCGACGA CGCCCTGCGC GCGGCCGACG CCGGGATGGA CGGGGTCGTG
GTGTCCAACC ACGGCGGCAG GCAGGTCGAT GGCGCCGTGG CCGCGCTCGA CGCGCTGCCC
GACGTCGTGG ACGCGGTCGC GGGACGCATG GAGGTGCTGT TCGACTCGGG CGTGCGCGGT
GGGGCCGACG TGCTCAAGGC GCTCGCGCTC GGCGCCCGCG CGGTGCTGCT GGGCAGGCCC
TACGCGTACG GGCTCGCGCA CGGCGGCCAG CAGGGCGTGC GGCACGTGCT GCGCTCCCTG
CTCGCCGACT TCGACCTCAC CCTCGGCCTG TCCGGGCACC GCAGCCCGGC CGAGCTGGGG
CGGGACGCCC TGCGCGCGGC CCCCGGACGC TGGGCGGGCT GA
 
Protein sequence
MTAQFAAYQN EIYLQGLAGT VPPFTTDPEG LAESARQRLG PGPYWYVAGA AGSGATARAN 
REAFDGWRIV PRMLTGASQR HLGVTVLGTE MPAPVLLAPI GVQSILHPDG ELATARAAAE
LGVPFVLSTA SSHTVEEVAE AAGDGPRWFQ LYRPNEPEVC ASILDRARKA GFSTLVVTLD
TWTLAWRPHD LDHAYLPFIR GIGTATPFSD PVFRAGLSAP PEEDLTEAVL RWVQMFTGTD
HRWEDLPFLR EHWDGPIVLK GVLHPDDALR AADAGMDGVV VSNHGGRQVD GAVAALDALP
DVVDAVAGRM EVLFDSGVRG GADVLKALAL GARAVLLGRP YAYGLAHGGQ QGVRHVLRSL
LADFDLTLGL SGHRSPAELG RDALRAAPGR WAG