| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1062 |
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| Symbol | |
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| ID | 8325236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1179597 |
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| End bp | 1181030 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644941608 |
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| Product | PTS system, fructose subfamily, IIC subunit |
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| Protein accession | YP_003098864 |
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| Protein GI | 256375204 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1299] Phosphotransferase system, fructose-specific IIC component |
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| TIGRFAM ID | [TIGR00829] PTS system, fructose-specific, IIB component
[TIGR01427] PTS system, fructose subfamily, IIC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGTTCG TCGCGATCAC CGCGTGCCCC ACGGGCATCG CGCACACCTA CATGGCCGCC
GAGTCGCTGG AGCAGGCGGC GAAGGCGTCG GGCGACGAGA TCGTCGTCGA GACGCAGGGC
TCCGCGGGCT CCGACCCGCT GCCCGAGGAG GCCATCGCCT CGGCCGACGC GGTCATCCTG
GCCGCCGACG TCGCGGTGTC CGGCCGCGAC CGGTTCGCCG GGCTGCCGGT GGTGGAGGCC
ACGGTCAAGC AGGCCATCAG CGGCGCCGCC GGCCTGCTGG AGCGGGCCAG GGCCGCAGCC
GCCGGGGGCG AGCGGGAACC CGCCGCCTCC GCCGACCCGG CCGGGCCCGC GCTGACCAGC
AAGGCCAAGC CCGGCGACGG GGTCGGCACC CGGCTGCGCC AGTGGCTGAT GACCGGCGTC
AGCTACCTCA TCCCGTTCGT CGCGGCGGGC GGTCTGCTCA TCGCGCTCGG CTTCGCCCTC
GGCGGCTACG ACGTCACCGA CGCGCCGCCC GTCACCGAGC ACTTCGACCC GGCCAGCATC
GCCAGCTGGG GCGCGCTCAG CCAGCAGACC GGCGCGCTCG CGTTCGGGTT CCTGGTGCCG
GTGCTCGCGG GCTTCATCGC GTTCGCCATG GCCGACCGGC CCGCCATCGC GCCCGGCTTC
GTCGGCGGCG CGGTCGCCTC GGCGACCGGC GCGGGCTTCC TCGGCGGCCT CGTCGCGGGT
CTCCTCGCGG GCGCGGTCGT GCTGGGGCTC AAGCGCGTCA AGGTGCCGAA GTGGATGGCC
GGGGTCATGC CGGTCGTGGT CTACCCGCTG CTCGGGTCGG CCGCCGTCGG CGTCCTCATG
TACCTCGTGG TGGGCAAGCC GGTCGCGGCG GCGACGACCG GGTTGACCAA CTGGCTCGGC
GGGCTCACCG GCACCAGCGC CGTCCTGCTC GGCGCCCTGC TCGGCCTGAT GATGGCGTTC
GACATGGGCG GCCCGGTCAA CAAGGCCGCC TACACGTTCG CCATCGGCGG CCTCACCACC
GACGCCCAGG CGTCGCTGGA GATCATGGCC GCCGTGATGG CGGCGGGCAT GGCGCCGCCG
CTCGCGCTGG CGCTGGCCAC GGCCGTGCGC GGCGCCCTGT TCACCCCGGT CGAGCGGGAG
AACGGGCGCG CCGCGTGGCT GCTCGGCGCG TCGTTCATCA CCGAGGGCGC GATCCCGTTC
GCCGCCGCCG ACCCGCTGCG GGTCATCCCG CCGCTCATGC TCGGCTCCGC CGTCACGGGC
GCGATGTCCA TGGGCCTCGG CGCGACGCTG CGCGCCCCGC ACGGCGGCCT GTTCGTGATC
GGCTTCATCG GCGGGCCGCT GCAGTTCCTG CTGTCCCTGC TGGTCGGCAC GCTCGTGTCC
GCCGCCGCCG TGGTGCTGCT CAAGCAGTTC ACGGGCGCAG CAAGAACGGC CTGA
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| Protein sequence | MKFVAITACP TGIAHTYMAA ESLEQAAKAS GDEIVVETQG SAGSDPLPEE AIASADAVIL
AADVAVSGRD RFAGLPVVEA TVKQAISGAA GLLERARAAA AGGEREPAAS ADPAGPALTS
KAKPGDGVGT RLRQWLMTGV SYLIPFVAAG GLLIALGFAL GGYDVTDAPP VTEHFDPASI
ASWGALSQQT GALAFGFLVP VLAGFIAFAM ADRPAIAPGF VGGAVASATG AGFLGGLVAG
LLAGAVVLGL KRVKVPKWMA GVMPVVVYPL LGSAAVGVLM YLVVGKPVAA ATTGLTNWLG
GLTGTSAVLL GALLGLMMAF DMGGPVNKAA YTFAIGGLTT DAQASLEIMA AVMAAGMAPP
LALALATAVR GALFTPVERE NGRAAWLLGA SFITEGAIPF AAADPLRVIP PLMLGSAVTG
AMSMGLGATL RAPHGGLFVI GFIGGPLQFL LSLLVGTLVS AAAVVLLKQF TGAARTA
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