Gene Amir_1061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1061 
Symbol 
ID8325235 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp1179151 
End bp1179600 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content76% 
IMG OID644941607 
Productputative PTS IIA-like nitrogen-regulatory protein PtsN 
Protein accessionYP_003098863 
Protein GI256375203 
COG category[G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) 
TIGRFAM ID[TIGR00848] PTS system, fructose subfamily, IIA component 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAAC TCATCACAGC CGACCTGGTC GACCTCGACC TCGCGCCCAG CTCGCGCGAG 
GCGGTCGTGC GCGCCCTCGC GGAGCGGCTC GTGGCGGCGG GCCGCGTCAC CGACCTGGAC 
CTGTTCCTCG CCGACGTCGC CGCCCGCGAG GCGCAGATGC CGACCGGCCT CGAAGGCGGC 
ATCGGCATCC CGCACTGCCG CTCGGCCGCC GTCACCGCGC CCACGCTCGC GTTCGGCCGC 
AGCGCGGCGG GCGTCGACTT CGGCGCCCCG GACGGCCCCG CGCACCTGGT GTTCCTGATC 
GCCGCGCCCG AGGGCGGCGG CACCGACCAC ATGAAGGTGC TCGCCGCGCT CGCCCGCAGG 
CTGGTGCGCG CCGAGTTCAC CACCACCCTG CGCGAGGCCA CCGACGCCGA GCAGCTCGCG 
GCCTACGTCC GGACCGAGGT CGCGCCGTGA
 
Protein sequence
MTELITADLV DLDLAPSSRE AVVRALAERL VAAGRVTDLD LFLADVAARE AQMPTGLEGG 
IGIPHCRSAA VTAPTLAFGR SAAGVDFGAP DGPAHLVFLI AAPEGGGTDH MKVLAALARR 
LVRAEFTTTL REATDAEQLA AYVRTEVAP