Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1058 |
Symbol | |
ID | 8325232 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1176403 |
End bp | 1177371 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644941604 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003098860 |
Protein GI | 256375200 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.787566 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCACCCC ACCGCGTGGT CGTGCTCGTG CTGCCGGACG TGGTCGCGTT CGACCTCGGC GTCCCCGGCC AGATCTTCGG CGGCGCCCGC GACGCGGCGG ACCGGAGGCT CTACCGGGTC GACGTGTGCA CCCCCGGTAG CGCGCCGGTG CGCTCGGCCT CAGGGTTCAC CGTCACCGCC GACCGGGGCC TCGACCTGCT CGGCGAGGCG GACACCGTCG TGGTGCCGGG CGTGCACGAC CGCGCGCTGA TCGACCGGGG CGAGCTGCCC GACGGGGTCG GCGAGGCGCT GCGGGCGGCG TCCGCGCGGG GCGCGCGCGT GATGTCCATC TGCACCGGCG CGTTCGCGCT CGCCGCCGCC GGGCTGCTCG ACGGCAGGCG CGCCACCACG CACTGGCTGC ACGCCGAGGA GTTCCGCCTG CTGTTCCCCC CGGTCGAGCT GGACCCCGGT GTGCTGTTCG TGGACTGCGG CGACGTGCTC ACCTCGGCGG GCGTGGCGGC GGGCATCGAC CTGTGCCTGC ACGTGGTGCG CGCGGACCAC GGCAGCGAGG TCGCGAACCG GGCGGCCAGG CGCAGCGTGG TGCCGTCGTG GCGGCCGGGT GGTCAGGCCC AGTTCATCGA CCGCCCGCTG CCCGCCGCGG GCGACGCGTC GACCGCGCCC GTGCGCGCGT GGGCGCTGGA GCACCTCGAC GAGCCGCTGG ACCTGCGCGC GCTGGCCGGG CGGGCGCGGA TGAGCGTGCG CACGTTCACC CGGCGCTTCC GCGAGGAGAC CGGCGCGAGC CCTGGCGAGT GGCTGCTGCG GCAGCGGGTC GACCGGGCGC GCAGGCTGCT GGAGACCACG GACCTGCCGG TGGACCAGGT CGCCAGGCAC GCCGGGTTCG GCACCGGAGC CGCGCTGCGC CAGCGGTTCG CCGCCGCGCT CGGGGTGTCC CCGAGCGGTT ACCGGACCAC GTTCCGCTCC GCCGGGTGA
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Protein sequence | MSPHRVVVLV LPDVVAFDLG VPGQIFGGAR DAADRRLYRV DVCTPGSAPV RSASGFTVTA DRGLDLLGEA DTVVVPGVHD RALIDRGELP DGVGEALRAA SARGARVMSI CTGAFALAAA GLLDGRRATT HWLHAEEFRL LFPPVELDPG VLFVDCGDVL TSAGVAAGID LCLHVVRADH GSEVANRAAR RSVVPSWRPG GQAQFIDRPL PAAGDASTAP VRAWALEHLD EPLDLRALAG RARMSVRTFT RRFREETGAS PGEWLLRQRV DRARRLLETT DLPVDQVARH AGFGTGAALR QRFAAALGVS PSGYRTTFRS AG
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