Gene Amir_1050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_1050 
Symbol 
ID8325222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1167448 
End bp1168533 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content74% 
IMG OID644941594 
ProductDNA-cytosine methyltransferase 
Protein accessionYP_003098852 
Protein GI256375192 
COG category[L] Replication, recombination and repair 
COG ID[COG0270] Site-specific DNA methylase 
TIGRFAM ID[TIGR00675] DNA-methyltransferase (dcm) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00805794 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGACC TGTTCGCCGG GTGCGGCGGC ATGACCTCCG GTTTCACCTC GGCGGGGTTC 
GAGCCGGTCA TGGCGGTGGA GCACGACCTG CACGCGGCGT CGACGTACGC GGCGAACTTC
GGCGAGGACC ACGTGCGGTG GGCCGACATC GCGGCGGTGC CGGACTCGGC GGTGCCGCGG
GTGGACGTCG TGGTGGGCGG GCCGCCGTGC CAGGGGTTCT CGACGCTGGG CTCGCGGGAC
GTGGACGACC CCCGGAACTC GCTGTGGCGG GAGTACCTGC GGGTGGTGCG GGCGGCGCGG
CCGTCGGTGT TCGTGATCGA GAACGTGGGG CGGTTCCTGG CGTCGACCGA GTTCGCGCTG
CTCCAGGCCG AGACCGAGGG GTACGAGCTG TCGGCGGGGG TGCTGCTGGC GGCCGACTTC
GGGGTGCCCC AGCGGAGGCG GCGGGCGATC GTGATCGGGT CGCGGGTGGG GAAGGTGGAG
CTGCCCGCGC CCACGCACGC GCGCGAGTCG TGGCACGCGG TGCGGGACGT GCTGACCGGG
TTGCCGGAGG TGCCCGCGTC GACCGCGCTG CCCAGGGCGT CGGCGGAGTT CTTCGGGCGG
TCGGTGCCGG GGCGGTTCAC GAGCACGGAC CTGCACGTCG GGCGGAACCC GACGCCGCTG
TCGCTGCTGC GGTACCGGCA CGTGCCGCCG GGTGGCGGGC GGTTCGACCT GCCGGACGAG
CTGCTGCCGA GGTGCTGGCG GGAGAAGAAG ACCGGGACGA CGGACGTGAT GGGGCGGATG
CGGTGGGACG AGCCGTCGCT GACCATCCGG ACCGAGTTCT ACAAGCCCGA GAAGGGGCAG
TACCTGCACC CGCAGTGGGA GCCGGGCGAG GACGGGCACC GGGTGGACCG GCCGATCACG
CACCTGGAGG CGGCGCGGCT GCAGGGGTTC CCGGACGGGT TCCGGTGGTG CGGGACGAAG
GGCGGGGTGG CGCGGCAGAT CGGCAACGCG GTGCCGCCGC CGCTGGCGCG GGCGGTGGCC
GAGCACGTGC GCGGGGCGCT GACCGGCGTC GCTCGACCGG GTGACTTCTG CCCGCTCTGC
CCGTGA
 
Protein sequence
MIDLFAGCGG MTSGFTSAGF EPVMAVEHDL HAASTYAANF GEDHVRWADI AAVPDSAVPR 
VDVVVGGPPC QGFSTLGSRD VDDPRNSLWR EYLRVVRAAR PSVFVIENVG RFLASTEFAL
LQAETEGYEL SAGVLLAADF GVPQRRRRAI VIGSRVGKVE LPAPTHARES WHAVRDVLTG
LPEVPASTAL PRASAEFFGR SVPGRFTSTD LHVGRNPTPL SLLRYRHVPP GGGRFDLPDE
LLPRCWREKK TGTTDVMGRM RWDEPSLTIR TEFYKPEKGQ YLHPQWEPGE DGHRVDRPIT
HLEAARLQGF PDGFRWCGTK GGVARQIGNA VPPPLARAVA EHVRGALTGV ARPGDFCPLC
P