| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1044 |
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| Symbol | |
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| ID | 8325216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1157476 |
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| End bp | 1159557 |
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| Gene Length | 2082 bp |
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| Protein Length | 693 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644941588 |
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| Product | Alpha-galactosidase |
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| Protein accession | YP_003098846 |
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| Protein GI | 256375186 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3345] Alpha-galactosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACGAGT CGACGAACGC GGCCGGGGAC GCCCCGGTCG ACCAGGACGG CACGACGGGC
GACGGCGCGG TGAGCGGCGG GACGGCAGGC GGCAGCTCAG CGGACGACAG CGCGGCGGGC
AGCGGCGCGG CGGGCAGCGG CGCGGCGGAA ACCGGTGCGC CGCAGGAGAT CAGGCCGCCC
GCGCTGGCGC CGACTCCCCC GATGGGCTTC AACAACTGGA ACTCCACCCA GTGCGGGCCC
GAGTTCACCG ACTCGATGAT CCGGGGCATC GCCGACCTCT TCCTCAGCCT CGGCCTCAAG
GACGCGGGCT ACGAGTACGT CAACATCGAC GACTGCTGGG CGCTGCCGCA GCGCGACGCG
GACGGCGACC TGGTGCCCGA CCCGGTCCGG TTCCCCGAGG GCATGAAGCC GCTCGTGGAC
TACGTGCACT CCAAGGGCCT GAAGTTCGGC ATCTACACCA GCGCGGGCAC CAGGACGTGC
AGCGAGCGCG GGTTCCCCGG CGCGCTCGGG CACGAGCGGC AGGACGCCGC GCTGTTCGCC
TCCTGGGGCG TGGACTACCT GAAGTACGAC AACTGCCACA ACCAGGGCGT CGACGCGAGG
CTGCGCTACC GGGCCATGCG CGACGCGATC GCCGCCACCG GCCGCCCGAT CGTGCTGAGC
GTGTGCGAGT GGGGCGAGAA CCGGCCGTGG GAGTGGGCGT TCGAGGTCGG GCAGCTGTGG
CGCACCACCC CGGACATCCG GGACAGCTGG GACTCGGTGC TGGAGATCGC CAAGGCGAAC
ATGGCGCTGG CCGAGCACGC CGGGCCGAAC CGGTGGAACG ACCCGGACAT GCTGGAGGTC
GGCAACGGCG GCCTGACCTG GGAGGAGTGC CGCACGCACT TCAGCCTGTG GGCGATGATG
GCCGCTCCCC TGCTGATCGG CGTGGACCTG CGGTCGGTGG CGCCCGAGGC GGTGGAGATC
CTGACCAACC GCGAGGTGAT CGCGCTCGAC CAGGACCCGC TCGGCGAGCA GGCGCGGGTG
GTGCGCTCCG AGGACGGGCT GCACGTGCTG GTGAAGCGGC TGCAGGACGG CGGGCGCGCG
GTGGCGCTGT TCAACGAGAA CGACGTGCCC GCGCGGATCT CGACCAGCGC CGCCGAGGCC
GGGCTCCCCC GGTCGACCGG GTACCGGCTG CGGGACGTGT GGGCGCGGAC CGACGCGCAC
TCGGCGGGCG ACGTCACGGC GTGGGTGCCG CCGCACGGCG CGGTCGTCTA CCGGGTGACG
CCCGAACCGG CGTGGCTGCT GCTGCCGCCC GCCGTGGACG CGGGGGTGGA GCCGGTGCTG
TCCCGGCCCG GCGCGCTGCC GCTGGTCGAC CCGGACGCCC CGTCGCTGGT GACCACCTCG
CTGGGCGACA ACGGCTGGCT GCCGGTGCTC GGCGCGCGGG TGGACCTGGA GGCCCCCGCC
GGGTGGCGGG TGCGGCCGAG GGGGCAGCGG GCCCGGTCGG TGCTCGCGGG CGGGGACCGG
CTGGACACCA CCTGGGAGGT GCTGCCGCCC GCCGGGCTCG AACCGGGCCG GTACCGGCTG
ACGGCGCTGT TCGCCTACCT GTACGGGTGG GGGCGGCGGG TGAGCGCGGA CCTGGAGGTG
GTGGTGCCGC ACCGCCTGCC GTCCGGCACC TCGTACCTGA GCGACGCGCC GTGGCTGCGG
GCGAGCAACG GGTTCGGGCC GGTCGAGGTC GACACCAGCA ACGGCGAGGC CGAGGCCGGG
GACGGCGGGC CGCTCACGGT CAACGGGAGG GTGTTCGAGA AGGGCCTCGG GGTGCACGCG
CCCAGCTCGG TCGAGTACTT CACCGGTGGC CGCTGCACGT CCGTGTCGGC GTTCGTGGGC
GTGGACGACG AGAAGCCCGC GGCCGGGTCG GTGGTGTTCC AGGTGTGGGC GGATGAGCGG
AAGGTCGCCG ACAGCGGGGC GCTGACCACG CGGGACGACG CGGTCGAGCT GGTCGCGGAC
GTGACCGGGG CGCGGACCGT GCGGCTGGTG GTGACCGACG CGGGCAACGG CGTCGACAGC
GACCACGGTG ACTGGTGCGA CCTGAAGGCC ACCTGCGAGT GA
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| Protein sequence | MDESTNAAGD APVDQDGTTG DGAVSGGTAG GSSADDSAAG SGAAGSGAAE TGAPQEIRPP
ALAPTPPMGF NNWNSTQCGP EFTDSMIRGI ADLFLSLGLK DAGYEYVNID DCWALPQRDA
DGDLVPDPVR FPEGMKPLVD YVHSKGLKFG IYTSAGTRTC SERGFPGALG HERQDAALFA
SWGVDYLKYD NCHNQGVDAR LRYRAMRDAI AATGRPIVLS VCEWGENRPW EWAFEVGQLW
RTTPDIRDSW DSVLEIAKAN MALAEHAGPN RWNDPDMLEV GNGGLTWEEC RTHFSLWAMM
AAPLLIGVDL RSVAPEAVEI LTNREVIALD QDPLGEQARV VRSEDGLHVL VKRLQDGGRA
VALFNENDVP ARISTSAAEA GLPRSTGYRL RDVWARTDAH SAGDVTAWVP PHGAVVYRVT
PEPAWLLLPP AVDAGVEPVL SRPGALPLVD PDAPSLVTTS LGDNGWLPVL GARVDLEAPA
GWRVRPRGQR ARSVLAGGDR LDTTWEVLPP AGLEPGRYRL TALFAYLYGW GRRVSADLEV
VVPHRLPSGT SYLSDAPWLR ASNGFGPVEV DTSNGEAEAG DGGPLTVNGR VFEKGLGVHA
PSSVEYFTGG RCTSVSAFVG VDDEKPAAGS VVFQVWADER KVADSGALTT RDDAVELVAD
VTGARTVRLV VTDAGNGVDS DHGDWCDLKA TCE
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