| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1040 |
|---|
| Symbol | |
|---|
| ID | 8325212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 1154158 |
|---|
| End bp | 1155252 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 644941584 |
|---|
| Product | Monosaccharide-transporting ATPase |
|---|
| Protein accession | YP_003098842 |
|---|
| Protein GI | 256375182 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4213] ABC-type xylose transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAAGGC TCGGGAGGGC GCTCTGCGCC GGGCTGCCCG CGCTGCTGCT CGCGGCCTGC
GGCGGCGCCG CCGGACCGCC GGAGCGCCCC ACCAGGCCGC TCGTCGGCGT GATCCTGCCC
GACACCGAGT CCTCCGCCCG CTGGGAGGAG CAGGACCGGC CGCAGCTCCA GCGCGCCCTG
GAGGCCGAGG GGCTCGAACC GGTCGTCGAG AACGCCCGCA ACGACGAGTT CCGGTTCGCC
AGCATCGCCG ACGACCTGAT CGCCAGGGGC GTGGCGGTCC TGCTGATCAC CCCGCTGACC
CCCGAGGGCG GGGCCACCGT CGAGCACAAG GCGCGCAAGG CAGGCATCCC CGTCATCGAC
TACGACCGGT TCAGCGTCGG CGGGGCCGCC GACTACCTCG TGTCCTTCGA CAACGAGGCC
GTCGGCGAGC TCCAGGCGCG CGGGCTCGTG GACTGCATGG GGGACCGGCG GGGCGCGCGG
GTGATCGAGC TGCAGGGCGC GCCGCAGGAC AACAACGCCA TGCAGTTCGC CGACGGGCAG
CGCCGCGTCC TCGGCCCCCG CTACGAGCGC GGCGACTACC GGCTCGTGGC CAGCACGAGC
GCCGACCGCT GGGACCCGCT GCTCGGGCGG GCCCGGTTCG AGCAGGCGCT CAACGACAGC
GGCGGGCGCG TCGACGGGGT CCTCGCGGCC AACGACCGGC TCGCCGCCGC CGCCATCCAG
GTGCTGCGCG CCAGGGGGCT GGCCGGGAAG GTGCCGGTGA CCGGGCAGGA CGCCACGGTG
GACGGGCTGC GCGCGGTGCT GCGCGGCGAG CAGTGCCTGA CGGTGCACAA GTCCATCCGG
GACGAGGCGG AGGCGGCGGC CCGGCTCGCC TCGGCGCTGG CGGACGGGGA CGTGGCGCGC
GCGGACGCGC TGGCGAGCGC GACCACCGAG GACCCGACGA ACGGGCGCCG GGTGAGGGCG
GTGCTGCTGG GGGCGGTCCC GGTGCACCGG GACGGCGTGC GGGTGCTGGT GGCGTCGGGG
GTGGTGCGCG CCGAGGAGCT GTGCGTGCCG GACCTGGAGC GGACCTGCGC CGAGCTGGGC
ATCGCGCCGA GGTGA
|
|---|
| Protein sequence | MRRLGRALCA GLPALLLAAC GGAAGPPERP TRPLVGVILP DTESSARWEE QDRPQLQRAL
EAEGLEPVVE NARNDEFRFA SIADDLIARG VAVLLITPLT PEGGATVEHK ARKAGIPVID
YDRFSVGGAA DYLVSFDNEA VGELQARGLV DCMGDRRGAR VIELQGAPQD NNAMQFADGQ
RRVLGPRYER GDYRLVASTS ADRWDPLLGR ARFEQALNDS GGRVDGVLAA NDRLAAAAIQ
VLRARGLAGK VPVTGQDATV DGLRAVLRGE QCLTVHKSIR DEAEAAARLA SALADGDVAR
ADALASATTE DPTNGRRVRA VLLGAVPVHR DGVRVLVASG VVRAEELCVP DLERTCAELG
IAPR
|
|---|
| |