Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1039 |
Symbol | |
ID | 8325211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 1152123 |
End bp | 1153850 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644941583 |
Product | peptidase S8/S53 subtilisin kexin sedolisin |
Protein accession | YP_003098841 |
Protein GI | 256375181 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1404] Subtilisin-like serine proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGATCAC GCAGAATCGC CCACCCCGCC CTGGTGCTGG TGGGAGCCGC CGCACTCGTC GCCGCCGCGA CGACGCCCGC CGCCGCCGAG CAGGCCACCA CCGAGTACAC CGTGCTGGTC GAGGATGGGG CCAGCCGGGA CGCCGCGGTC GCGGCGGTGC GCGCTGCGGG CGGCCACCTG GTCCGCGAGA ACAGCGCGGT CGGGATGCTG GTCGTGCGGG CGCCGGAGTC CGGTTTCGCC GGGCGCGTCT CCGCCTCGCC GTCGGTGCTG GGCGCGGCCA CGGCCAAGCC GATCGGCCGC ACGCCCGGTT CGGTGGGCAA CCGCGAGTGG TCCGACGTGG AGAAGGAGAA CACCGCGCTG GGCGCGGCGA AGGCCCCCTC CGCGTCGCGC AAGGCCGCTG CCGCGCAGGC GGGCCTCGAC CCGCTGGACA GCGACCTGTG GGGCCTGCGC GCGGTGCGCT CCGACATCGC CCGCGCCAAG CAGCCCGGCG ACAAGCGGGT CAAGGTCGGC GTGATCGACA CCGGCGTCGA CGGCAACCAC CCGGACATCG CGCCGAACTT CGACCGCGAC CTGTCCCGCA ACTTCACCGT CGACCTGCCC TACGACGCGG ACGGCGGCGA GTTCGACGGC CCGTGCGAGT TCCGGGGCTG CGTCGACCCG GCGGACCACG ACGACGGCGG CCACGGCACG CACGTCGCGG GCACCATCGG CGCGGCGGCC AACGGCTCCG GCGTCTCCGG CGTCGCCCCG AACGTCACCC TGGTGAACGT GCGGGCGGGC CAGGACTCGG GCACGTTCTT CCTGCAGCCG GTCGTCGACG CGCTCACCTA CAGCGCGGAC GCGGGCCTGG ACGTGGTGAA CATGTCCTTC TACGTCGACC CGTGGTACAT GAACTGCGGC AACGACCCCA CGGCCACCGC CGAGGAGCAG CTGGAGCAGC GCACCACCAT CACCGCGGTG CAGCGCGCCC TGAACTACGC GCACGGCAAG GGCGTCACGC TGATCGGCGC GGGCGGCAAC AACCACGAGG ACCTCGGCAG CCCGAGGACG GACGTGGTGA GCCCGAACTA CCCGCCCGGC CACGCCCGGC CGCGCCCGGT GGACTCCAGC TGCCTGAACC TGCCGACCGA GGGCGACCAC GTCATCTCGG TGTCGGCGCT CGGCCCGTCG CTGACGAAGG CCGACTTCTC GAACTACGGC ACCGAGCAGA CCGAGCTGTC CGCGCCCGGC GGGTACTTCC GCGACGGCCT GGGCACCGAC TGGTACCGCA CGAACGAGAA CCTGGTCCTG TCGACCTACC CGCGCAACGT GGCCCTGGCC GACGGCGCGA TCGACGCGGA CGGCAACCTC ACCCCGGCGG GCGAGTCGGC GGGCGTGAGG AAGGACTGCT CGACCGGGAC CTGCGCGTAC TACCAGTTCC TGCAGGGCAC CTCGATGGCC GCCCCGCACG CGTCCGGCGT GGCCGCGCTG GTGGTCAGCC AGTACGGCAA GAACGACAAG AAGCACCCCG GCACGCTGAC CATGGCGCCG GACAAGGTGA AGACCGTGCT GACCGGGACC GCGACCAAGC GGCCGTGCCC GGTGCCCAGG ACGGTGTCGT ACGTGAACGT CGGCCGCTCG GCCGAGTTCG ACGCGACCTG CGTGGGCGAC GCGAAGTTCA ACGGCTTCTA CGGCCACGGC ATCGTCGACG CGTACGGCGC GGTGACCAGG GGCGGCGGGC TGATCTAG
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Protein sequence | MRSRRIAHPA LVLVGAAALV AAATTPAAAE QATTEYTVLV EDGASRDAAV AAVRAAGGHL VRENSAVGML VVRAPESGFA GRVSASPSVL GAATAKPIGR TPGSVGNREW SDVEKENTAL GAAKAPSASR KAAAAQAGLD PLDSDLWGLR AVRSDIARAK QPGDKRVKVG VIDTGVDGNH PDIAPNFDRD LSRNFTVDLP YDADGGEFDG PCEFRGCVDP ADHDDGGHGT HVAGTIGAAA NGSGVSGVAP NVTLVNVRAG QDSGTFFLQP VVDALTYSAD AGLDVVNMSF YVDPWYMNCG NDPTATAEEQ LEQRTTITAV QRALNYAHGK GVTLIGAGGN NHEDLGSPRT DVVSPNYPPG HARPRPVDSS CLNLPTEGDH VISVSALGPS LTKADFSNYG TEQTELSAPG GYFRDGLGTD WYRTNENLVL STYPRNVALA DGAIDADGNL TPAGESAGVR KDCSTGTCAY YQFLQGTSMA APHASGVAAL VVSQYGKNDK KHPGTLTMAP DKVKTVLTGT ATKRPCPVPR TVSYVNVGRS AEFDATCVGD AKFNGFYGHG IVDAYGAVTR GGGLI
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