| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1034 |
|---|
| Symbol | |
|---|
| ID | 8325206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 1143461 |
|---|
| End bp | 1144645 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644941578 |
|---|
| Product | domain of unknown function DUF1727 |
|---|
| Protein accession | YP_003098836 |
|---|
| Protein GI | 256375176 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCGA AGCTGTCGCA GAAGATGGGG TTGGGCGCGG GCGGCATGAT CGGTGGCCGC
ATCGCCCTCA AGCTCGACCC GCAGGCACTG GCCCACCTCA CGTCCGGGCG CAGGGTCGCG
CTCGTCACGG GCACCAACGG CAAGACCACG AGCACGATGA TGCTCAGCAG GGCCGTGTCG
GCCCTGGGCG AGGTCGCGAC CAACCACGGC GGCGCCAACA TGCCGGACGG GCACGTGACC
GCGCTGAGCA AGCAGCAGGA GGCGCCGTAC GCGGTGCTGG AGGTCGACGA GGGGTACTTC
CCCGAGGTCG TCCGGGCGTC CAACCCGTCC GTCGCGGTGC TGCTGAACCT CAGCCGGGAC
CAGCTCGACC GGGTCGGCGA GGTCCGCACG ATCGAGCGGA ACCTGCGGGA GGCACTGAAC
ACGGTCACCG GCGTCGTCGT GGCGAGCTGC GACGACATCA TGGTCACCTC GGCCGCGCGG
GACTGCGCGC GGGTGATCTG GGTGTCCACC GGCACCGGCT GGCACAACGA CGCGGCCTCG
TGCCCGCGCT GCGGCGACCC GATCCGCTGG CAGGGCGAGC ACTGGCACTG CACCAACTGC
GACCTGGCCC GGCCCAAGCC GGACTGGGTG ACCGGGGACG GCTTCCTGAT CACGCCCAGG
GGCGAGCGGG TCGAGCTGTC GCTGCGGCTG CCGGGCAAGT TCAACATGGC CAACGCGGTC
ATGGCCGCCG CCGCCGCCGC CGAGATGGGC GTCGCGGTGC CGGACGCCGT GCAGCGGCTC
CGCACGGTGT CCAACGTGGC CGGTCGCTAC CGGACGATCC AGCGCTCCGG CAGGCGCGCC
AGGCTGCTGC TGTCGAAGAA CCCGGCGGGC TGGAGCGAGA CGCTGACCGT GGTCCGCGAG
TCGGCCCACC CGGCGGTGCT GGCGATCAAC GCGCACGAGG CCGACGGCCG CGACCTGTCG
TGGCTGTGGG ACGTGCCGTT CGAGCAGCTG CAGGGCAGGC GGGTGATCGC CTCGGGCGAG
CGCGCGACGG ACCTGGCGGT GCGGCTGACG TACGCCGAGG TCGAGCACAC GATCATCCCG
GACCCGCTGG AGGCGATCGA CGCGATGCCG GTGGGCGACG TCGAGGTCAT CGCCAACTAC
ACGGCGTTCC GCGACCTGAA CGCGAGGTCC GCTGATGGCG AGTAA
|
|---|
| Protein sequence | MSSKLSQKMG LGAGGMIGGR IALKLDPQAL AHLTSGRRVA LVTGTNGKTT STMMLSRAVS
ALGEVATNHG GANMPDGHVT ALSKQQEAPY AVLEVDEGYF PEVVRASNPS VAVLLNLSRD
QLDRVGEVRT IERNLREALN TVTGVVVASC DDIMVTSAAR DCARVIWVST GTGWHNDAAS
CPRCGDPIRW QGEHWHCTNC DLARPKPDWV TGDGFLITPR GERVELSLRL PGKFNMANAV
MAAAAAAEMG VAVPDAVQRL RTVSNVAGRY RTIQRSGRRA RLLLSKNPAG WSETLTVVRE
SAHPAVLAIN AHEADGRDLS WLWDVPFEQL QGRRVIASGE RATDLAVRLT YAEVEHTIIP
DPLEAIDAMP VGDVEVIANY TAFRDLNARS ADGE
|
|---|
| |