| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1026 |
|---|
| Symbol | |
|---|
| ID | 8325197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 1135785 |
|---|
| End bp | 1136843 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 644941569 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_003098828 |
|---|
| Protein GI | 256375168 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2072] Predicted flavoprotein involved in K+ transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.565957 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGACAGCG CGGCGGGGGT CCTGGACGTC GTCGTGATCG GCGCGGGTCA GGCCGGGTTG
GCGAGCGCGC ACGCGCTGCG CCGCTCCGGG CTGCGCCACG TGGTGCTGGA CGCCGAGGAC
GGCCCCGGCG GCGCGTGGCG GCACCGCTGG CCGACGCTGC GCATGGCCAC CGTGCACGGC
ATCCACGACC TGCCGGGGAC CCCGTTCGAC CCGCCGCCGC CGGACGTCCC GGCCCGCGAG
GCGCTGCCCG CGTACTTCGC CGACTTCGAG CGCCGCAACG GCGTGGAGGT GCTGCGCCCG
GTCCGGGTGT CGGCGGTGCG CGACCGGGAC GGGCTGCTGG TCGTGGCGAC CGACCGGGGG
GAGTGGACCA CCAGGGCGCT GATCAGCGCG ACCGGCACGT GGACGCACCC GTTCTGGCCG
CGCTACCCCG GTCAGGAGCT GTTCCGGGGA CGTCAGCTGC ACAGCGCCCA GTACGCGGGG
CCCGAGGAGT TCGCCGGGCG GCACGTGGTC GTGGTCGGCG GCGGGACGTC GGCGGTGCAG
CAGCTGCTGG AGATCGCCGA GCACGCCACC ACCACGTGGG TCACCCGGCG CGAGCCGGTG
TTCCGGAGCG AGCCGTTCAC GCCCGAGGTG GGGCGGGCGG CGGTGGCGCT GGTGGAGGAG
CGGGTGCGCG AGGGGCTGCC GCCGCGCAGC GTCGTCAGCG TCACCGGGCT GGTGCTGAAC
GAGGCCGTGC GGGCGGCCGT GGACAGCGGG GTGCTGCGGC GCGAACCCGC GTTCGAGCGG
ATCACCGAGG ACGGCGTGGT GTGGCCGGAC GGGCGGTTCC AGCGGGCCGA CGCGATCCTG
TGGGCGACCG GCTACCGCGC GGCGCTGGAC CACCTCGCCC CGCTGCGGCT GCGCGGGCCC
GGCGGGGGAG TGCGGCTGGA CGGGACCGGG GTCGTGGCGG ACCCGCGCGT GCACCTGGTC
GGGTACGGGC CGTCGGCCAG CACGGTCGGG GCCACGCGCG CGGGGCGGGC GGCGGTGAAG
CGGATCAAGG ACCTGCTGGC GGCGCGGGTG CCCGCCTGA
|
|---|
| Protein sequence | MDSAAGVLDV VVIGAGQAGL ASAHALRRSG LRHVVLDAED GPGGAWRHRW PTLRMATVHG
IHDLPGTPFD PPPPDVPARE ALPAYFADFE RRNGVEVLRP VRVSAVRDRD GLLVVATDRG
EWTTRALISA TGTWTHPFWP RYPGQELFRG RQLHSAQYAG PEEFAGRHVV VVGGGTSAVQ
QLLEIAEHAT TTWVTRREPV FRSEPFTPEV GRAAVALVEE RVREGLPPRS VVSVTGLVLN
EAVRAAVDSG VLRREPAFER ITEDGVVWPD GRFQRADAIL WATGYRAALD HLAPLRLRGP
GGGVRLDGTG VVADPRVHLV GYGPSASTVG ATRAGRAAVK RIKDLLAARV PA
|
|---|
| |