| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1017 |
|---|
| Symbol | |
|---|
| ID | 8325188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 1129333 |
|---|
| End bp | 1129836 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 644941560 |
|---|
| Product | Hemerythrin HHE cation binding domain protein |
|---|
| Protein accession | YP_003098819 |
|---|
| Protein GI | 256375159 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCAACTG ACGTCGTAGA GCTCATCCTG GCCGACCACC GCAGGTTCGA GGAGCTGTTC
CGCGCGCTCC GCGACCGCAC CAACGACCGC GCCGCCCTGC AGGGCGAGCT GTCCGCGCTG
CTCGTCGCGC ACGCCGAGGC CGAGGAGGCC GAGGTCTACC CGGCGCTCAA GCGGTACAAG
CGCATCGACA ACGAGGAGGT CGACCACGGC GCCGAGGAGC ACGCCGAGGG GCACCAGGCG
CTGCTCGCGC TGCTGGAGGT CGGGGACACC TCGTCGCAGG CGTGGGAGGA CAAGCTGGAG
GAGCTGGTCG AGGCGATGAC GCACCACGTC GACGAGGAGG AGCGGACCAT CCTCAACGAC
ACCAGGTCGC GGGTGGCCGA CGACCGGCGC GAGGAGCTGG GGCGGCTGTT CCTGCGGGTG
CGGCAGGAGA AGCTGGACAG CGGGTGCGGG GACGTGGAGA GCGTGCGGCG CGTCGCCGCC
GCCACCGAGG AGCGGATCGA CTAG
|
|---|
| Protein sequence | MATDVVELIL ADHRRFEELF RALRDRTNDR AALQGELSAL LVAHAEAEEA EVYPALKRYK
RIDNEEVDHG AEEHAEGHQA LLALLEVGDT SSQAWEDKLE ELVEAMTHHV DEEERTILND
TRSRVADDRR EELGRLFLRV RQEKLDSGCG DVESVRRVAA ATEERID
|
|---|
| |