| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1014 |
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| Symbol | |
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| ID | 8325185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1127087 |
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| End bp | 1127722 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644941557 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003098816 |
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| Protein GI | 256375156 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGACCCCG CTGCCCCGTC CTCCCGCGCT CCCCGCCCGC TCTCCCACCG CGTCATCCCG
CCGAAGCCGC TGCTGTCGGC GGTGGTCGTG CTGCTGTTCA CCGGCGCCCT CTACGTCATC
GAGGGCATCG ACACGGTCCT CCTGGGCGCG CTCGACGCCA ACGGCGTCCG GCCGCGCGTG
TGGTCCGAGT GGGACAACCT GCTCTGGGCC CCGGTGCTGC ACGCGGGCTG GGACCACCTG
ATCGCGAACT CGCTGCCGCT GCTCGTGCTC GCCTTCCTGG CGTCCTCGGG CGGGGTCAGG
CAGTTCTTCC AGGTCACCGC CGTCATCTGG CTCGCCAGCG GCCTGGGGGT GTGGGTGTTC
GGCTCGGTCG GCGTGCACCT GGGCGCGTCC GGGCTGATCT TCGGCTACCT CACGTTCCTG
CTGGTGCGCG GCGTCTTCGT GCGCAGCGCG TGGCAGATCG TGGTCGCGAT CGCGGTGTTC
GCGGTCTACG GCGCGGTGCT GTGGGGCGTG CTGCCCGGCC AGCCGGGGAT CTCCTGGGAG
GGTCACCTGT TCGGCGCGGT CGGCGGCGTG CTGGCCGCCT GGGGCGTGGC GCAGGACGCC
AAGGCCGAGC GCAAGCGGGC TAATGTCGTA ACGTGA
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| Protein sequence | MDPAAPSSRA PRPLSHRVIP PKPLLSAVVV LLFTGALYVI EGIDTVLLGA LDANGVRPRV
WSEWDNLLWA PVLHAGWDHL IANSLPLLVL AFLASSGGVR QFFQVTAVIW LASGLGVWVF
GSVGVHLGAS GLIFGYLTFL LVRGVFVRSA WQIVVAIAVF AVYGAVLWGV LPGQPGISWE
GHLFGAVGGV LAAWGVAQDA KAERKRANVV T
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