Gene Amir_0990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0990 
Symbol 
ID8325161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1105046 
End bp1106266 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content74% 
IMG OID644941534 
Productphosphoserine phosphatase SerB 
Protein accessionYP_003098793 
Protein GI256375133 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0560] Phosphoserine phosphatase 
TIGRFAM ID[TIGR00338] phosphoserine phosphatase SerB
[TIGR01488] Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCAGCG CGACCCCAGT CCTGATCACC GTGACCGGCC CGGACAAGCC GGGCGTGTCC 
TCGGTGCTGT TCGCCGTGCT CACCAGGCAC GGGGTCGACG TGCTCGACGT CGAGCAGGTC
GTGATCCGGG GCAGGCTGGT GCTCGGGGTG CTGGTGTCCG CCCAGCGCGA CCCCGAAGGC
ATCCAGGAGG CCGTGGAGCA GGCCATGGCG ACGGTGTCGA TGAGCGTCGA GGTGGAGATC
GGCGCCGACT CGCGCCGCAC CGCCCGGCTG GAGTCCAGCC ACGTCCTGAT CCTGCTGGGT
CACCCGGTCA CCGCGCGGGC GTTCACCGAG GTCGCCCGCA AGCTCGCCGC GCTCGGCGCG
AACATCGACG CCATCCGGGG GGTCGCCGAC TACCCGGTGA CCGGGCTGGA GCTGCGGATC
TCGGTCGCCC ACGACACCGA GGAGGCGGAC GCGCAGCTGC GCGCGGCGCT CGCCGTCGTG
GCCGCGCGCG CCGGGGTGGA CGTGGCCGTG GAGCGGGCCG GGCTGACCAG GCGGGCCAAG
CGGCTCGTCG TGTTCGACGT GGACTCCACG CTCATCCAGG GCGAGGTGAT CGAGATGCTG
GCCGCGCACG TGGGCGTGGA GCCCCAGGTC CGCGAGATCA CCGAGGCGGC CATGCGGGGC
GAGCTGGACT TCGCCGAGTC GCTGGAGAGG CGCGTGGCGC TGCTGGAGGG CCTGGACGAG
GGCGTGCTGG ACGAGGTGGC CGCGTCGCTG GAGCTGACGC CCGGCGCGCG CACCACGATC
CGCACCCTCA AGCGGCTCGG GTTCCGCTGC GGGGTCGTGT CGGGCGGGTT CACCAGGGTG
ATCCGGTCGC TGGTCACCGA GCTGGGGCTG GACTTCTGCG CGGCCAACGA GCTGGAGGTC
GTGGACGGCA AGCTGACCGG CCGGGTGCTC GGCGAGATCG TGGACCGGCC GGGCAAGGCG
GTGGCGCTGC GGCGGTTCGC GGACTCGGTC GGGGTGCCGA TGGCGCAGAC CGTCGCGGTC
GGGGACGGGG CGAACGACAT CGACATGATC GGCGCGGCCG GGCTGGGCAT CGCGTTCAAC
GCCAAGCCGG CGCTGCGCGA GGTCGCGGAC ACCGCGCTGT CGCACCCGTT CCTGGACGCG
GTGCTGTTCG TGCTCGGCGT GACGCGCGCC GAGGTGGAGG CCGCGGACCT CGCGGACGGG
CTGGACCTGG TGCGCCAGTG A
 
Protein sequence
MPSATPVLIT VTGPDKPGVS SVLFAVLTRH GVDVLDVEQV VIRGRLVLGV LVSAQRDPEG 
IQEAVEQAMA TVSMSVEVEI GADSRRTARL ESSHVLILLG HPVTARAFTE VARKLAALGA
NIDAIRGVAD YPVTGLELRI SVAHDTEEAD AQLRAALAVV AARAGVDVAV ERAGLTRRAK
RLVVFDVDST LIQGEVIEML AAHVGVEPQV REITEAAMRG ELDFAESLER RVALLEGLDE
GVLDEVAASL ELTPGARTTI RTLKRLGFRC GVVSGGFTRV IRSLVTELGL DFCAANELEV
VDGKLTGRVL GEIVDRPGKA VALRRFADSV GVPMAQTVAV GDGANDIDMI GAAGLGIAFN
AKPALREVAD TALSHPFLDA VLFVLGVTRA EVEAADLADG LDLVRQ