Gene Amir_0976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0976 
Symbol 
ID8325147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp1088702 
End bp1091029 
Gene Length2328 bp 
Protein Length775 aa 
Translation table11 
GC content78% 
IMG OID644941521 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003098780 
Protein GI256375120 
COG category[R] General function prediction only 
COG ID[COG0457] FOG: TPR repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGGCG CACCGCGTCG GGCCGGCGGG GTCTCCCCCG CCCTGGTGCG CACCCTCTCC 
GACCTCTCGC GCGAGCTGGA GCTGCTGCGG GGCAGGGCCG CGCGGGGCAG CGGCAAGGCC
AAGGTCAGCC TCGCCGAGCT GGCCGCGCAG GTGGGCGTGC CGAAGTCGAC CATGCACACC
TACGTCACCG GCAGCACCCT CGCGCCCGCC GACGTGCTGG ACCGGGTGGT GATCGCGCTG
GGCGCGACGC CCGCCGAGCA GTCGCTGTGG GGCGAGGCGT GGTTCCGGGT GGCGGAGAGC
GTCCACGAGG CCCGCAGGCA GCCCCGGCCG CCGCCGGTCG ACCGCCCGGT GCCCCGGCAG
CTGCCCGCCG CGCCCGGCCG GTTGTTCACC GGGCGCTCCC GCGAGCTGGC CGAGCTGGAC
GCGGCGGTGG CCGGTCCGGG CTCGCTGCCG GTCGTGGCGC TGGGCGGGGC GGGCGGCACC
GGCAAGACGT GGCTGGCGCT GCACTGGGCG CACCACAACG TCGACCGCTT CCCGGACGGG
CAGCTGTACG TGGACCTGCG CGGGTTCGAC CCCGGCGGCA CGCCGGTCTC GCCGGGGGCC
GCGCTGCGCG GGTTCCTCGA CGCGCTGGGC GTGCGCGCCC CGTCGTTCCC CACCGACCCC
GCCGCCCAGG TCGGGCTGTA CCGCAGCCTG GTGGCGGGCC TGCGCGTGCT GGTGGTGCTG
GACAACGCCC GCGACCTGGC GCAGGTCGAG CCGCTGGTGC CCGGTGGCGC GTCGGCGACC
GTGCTCGTGA CCAGCAGGCA CAAGCTCCCC GGACTGGTGA CCACGCACGG CGCGCGGTCG
CTGCGCGTCG ACGTGCTCGG GCCCGCCGCG TCCCGCGACC TGCTGGGCCG CCACCTGGGC
GCGGAGCGCG TGGCGGCCGA GCCGGAGGCG GTGGACGCGG TGGTGCGGAC CTGCGCGGGG
CTGCCGCTGG CGCTGGGCCT GGTGGCGGCG CGCGCGTCGA CCGAGCCGGA CCTGCCGCTG
CGCGAGCTGG CGCGGGAGCT GGGGCGCTCG GCGTCGAGCC CGCTGGACGC GCTGGAGCTG
GACGACACCG GGCTGCGCTC CACGTTCTCC TGGTCCTACC GGGACCTGCC CGCCGACGCG
GCGCGCGCGC TGCGGCTGCT GGGCGCGTGC CACTGCCCGG ACCTGGACGC GGCGGCCGTC
GCGGCGCTCA CCGGCGGCGA CCTCGACGGC GCGGGGCGGG CGCTGGCCGT GCTGGGGCGG
GTGCACCTGG CGCGGCGGTC GCCGGACGGG CGGTTCCACA CGCACGACCT GGTGCGCGCG
TACGCGGCGG ACCTCGCGGC GGCGAACGAC GGGCCCGCGG CGGTGGACGC GGCGCTGGAG
CGGCTGGTCG AGCACCTGCT CGGGCGGGTG GCGTCGGCGA TGGACGTGGT GGCCCCGTAC
GAGCGGCTGC ACCGGCCGAC CGGCGGTGGC GCGCCGCCGG GGTTCGGGTA CCCGGAGGCG
CTGGCCTGGC TGGACGCCGA GCGGCACAAC CTGGTGGCGC TGGCCGCGCG CGGCACGCCC
GAGCAGACCG GCAGGCTGTC CACGTCGCTG CACCGCTACT TCGTGGTGGG CGCGCACTTC
GCCGACGCGC TGGCGGTGCA CGGCCACGCG CTGGACCGCG CGCACACCGG GGAGGCCAGG
TCGAACGCGC TGCGGCACCT GGGCGCGGTG CACCGCTGGC TGGGCGACTA CGACCGCGCG
CTCGCCTACA ACGAGGACGC GGCGGCGCTG GCCGGGCGGC TGGGCGACCG CAGGCTGGAG
CACGCGGCGC TGAACAACAT CGGCATCATC CACGAGCGCA CCGGTCGGCA CGCCGAGGCG
CTGGCGCGCT ACGAGCGGGT GCTGCGCTAC GCGGAGGAGA CCGACGACCG GTTCGCGCGC
GGCACCGTGC ACCACAACCT GGGCAGCCTC TACCAGCGCA TGGCCGACTA CCCGCACGCG
CTGGAGCACT ACCGGGAGGC GCTGGCCGTG GCGGGGAGCG CGGACGACCA CAACCTGCGC
GGGTTCACGC ACAACGACCT GGGGCGGCTG CACGTGCGGC TCGGGCAGCA GGCGCGGGCC
CGCGAGCACC TGGAGCAGGC GCTGGCGCTG GCGGTGGAGC ACAACGACCG GAGCCTGCAG
ACCGAGGTGC TCAACGCGCT CGGGGAGCTG CACCACGCGC TCGGGGACGT GCCGCGCGCG
CTGGGGCACC ACCGGGACGC GCTGGTGCTG GCCGAGGGCG TCGGGCGCGC CGACGAGATC
GCGCGGGCCG AGCAGGGCAT CCTGCGCTGC GAGGGCCCCC GGACTTGA
 
Protein sequence
MTGAPRRAGG VSPALVRTLS DLSRELELLR GRAARGSGKA KVSLAELAAQ VGVPKSTMHT 
YVTGSTLAPA DVLDRVVIAL GATPAEQSLW GEAWFRVAES VHEARRQPRP PPVDRPVPRQ
LPAAPGRLFT GRSRELAELD AAVAGPGSLP VVALGGAGGT GKTWLALHWA HHNVDRFPDG
QLYVDLRGFD PGGTPVSPGA ALRGFLDALG VRAPSFPTDP AAQVGLYRSL VAGLRVLVVL
DNARDLAQVE PLVPGGASAT VLVTSRHKLP GLVTTHGARS LRVDVLGPAA SRDLLGRHLG
AERVAAEPEA VDAVVRTCAG LPLALGLVAA RASTEPDLPL RELARELGRS ASSPLDALEL
DDTGLRSTFS WSYRDLPADA ARALRLLGAC HCPDLDAAAV AALTGGDLDG AGRALAVLGR
VHLARRSPDG RFHTHDLVRA YAADLAAAND GPAAVDAALE RLVEHLLGRV ASAMDVVAPY
ERLHRPTGGG APPGFGYPEA LAWLDAERHN LVALAARGTP EQTGRLSTSL HRYFVVGAHF
ADALAVHGHA LDRAHTGEAR SNALRHLGAV HRWLGDYDRA LAYNEDAAAL AGRLGDRRLE
HAALNNIGII HERTGRHAEA LARYERVLRY AEETDDRFAR GTVHHNLGSL YQRMADYPHA
LEHYREALAV AGSADDHNLR GFTHNDLGRL HVRLGQQARA REHLEQALAL AVEHNDRSLQ
TEVLNALGEL HHALGDVPRA LGHHRDALVL AEGVGRADEI ARAEQGILRC EGPRT