| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0972 |
|---|
| Symbol | |
|---|
| ID | 8325143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 1085849 |
|---|
| End bp | 1086679 |
|---|
| Gene Length | 831 bp |
|---|
| Protein Length | 276 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 644941517 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003098776 |
|---|
| Protein GI | 256375116 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGGCGC GGAAGGTGCT GTGGCACGGG ATCGTCCTGG CCGCGCTGGC GCTGCTGCTG
TACCCCGTGG TGTGGCTGGT GGGCACCTCG TTCAAGCCCG CCGAGGAGGT GCTCTCGACG
CTGTCGCCGC TGGGGGACGA CCCGACCACC GACAACTACG CGCAGGTCTT CGACGGGGTC
GGCGAGTTCG GGGTGTGGCA CTACTTCGGC AACTCGCTGC TGGTCTCGCT CGGCGCCGTC
GTCGGCAACG TGGTGTCGTG CGCGCTCGCG GCCTACGCGT TCGGGCGGCT GCACTTCCGG
GGCCGGGGAC CGATGTTCGG GTTCATGATG ATCACGATCA TGCTGCCGCA CCACGTGGTG
CTCATCCCGC AGTACGTGAT CTTCCAGCAG CTCGACATGG TCAACACGTT CTGGCCGCTG
GTGCTGCCCA AGTTCCTGGC CACGGACGCG TTCTTCGTGT TCCTGATGGT GCAGTTCATC
CGCACCCTGC CGCGCGAGCT GGACGAGGCC GCCACGCTCG ACGGCTGCGG ACCCGCCGGG
GTCTTCCGGC ACGTGGTGCT GCCGCTGCTG CGACCGGCGC TGATCACCAC GGCGATCTTC
TCGTTCATCT GGTCCTGGAA CGACTTCTTC AGCCAGCTGA TCTACCTCAA CGACGCGGAG
AGGTTCACGC TCCCGCTGGC GCTCCAGCTG TTCATCGACC AGGCCACGCA GTCGGCGTTC
GGGCCGATGT TCGCCATGTC GGTGCTCGCG CTGCTGCCCA TCGGGCTGTT CTTCCTGGCG
TTCCAGCGGT TCCTGGTCGA GGGCGTGGCG ACCTCCGGGG TGAAGGGGTG A
|
|---|
| Protein sequence | MTARKVLWHG IVLAALALLL YPVVWLVGTS FKPAEEVLST LSPLGDDPTT DNYAQVFDGV
GEFGVWHYFG NSLLVSLGAV VGNVVSCALA AYAFGRLHFR GRGPMFGFMM ITIMLPHHVV
LIPQYVIFQQ LDMVNTFWPL VLPKFLATDA FFVFLMVQFI RTLPRELDEA ATLDGCGPAG
VFRHVVLPLL RPALITTAIF SFIWSWNDFF SQLIYLNDAE RFTLPLALQL FIDQATQSAF
GPMFAMSVLA LLPIGLFFLA FQRFLVEGVA TSGVKG
|
|---|
| |