Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0954 |
Symbol | |
ID | 8325124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1060794 |
End bp | 1062101 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644941499 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003098759 |
Protein GI | 256375099 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00880] Multidrug resistance protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGCTGGGGA GAACGACGGA GCGGACAGCG CAGCGGCTGC CCGCCGAGGT GTGGGTTCTG GTCGTGGCGA GCTTCATCAT CGCCATCGGC TTCGGGATCG TCGCACCGGC ACTCCCGATC TTCGCTGACA GCTTCGGCGT CGGGTCCACG GCCGTCGCGC TCGTGATCAG CTCGTTCGCC GTCGTGCGCA TCCTGTTCGC CCCGGTGAGC GCCAAGCTCG TCACCCGGTT CGGCGAGCCC AAGACCTACA TCGCGGGCAT CGTCATCGTC GCCCTCGGCA CCGCGGCCTG CGGTTTCGCC GTCACCTACT GGCAGCTGCT GTTCCTGCGC GCCTTCTCCG GCATCGGCTC GACCATGTTC ACGGTCGCCT CCGTCGGCCT GCTCATCCGC ATCACCCCGC CCGCCCAGCG CGGCCAGGCC ACCGGCCTGT GGTCCACCGG CTTCCTGCTC GGCAACATCT TCGGCCCGAT CATCGGCGCC GCCCTCGTCG GCGTGTCCGT GCAGCTGCCG TTCGTCAGCT ACGCCGCCGC GCTGCTCGTC GCCGCCACGT TCGTGTGGTG GTTCCTGCGC AAGTCCACGC TCGCCGCGCT CGACACCAGC GCCCGGCCGG AGAGCCCCGT CACCGTCCGC CAGGCGCTGC GCAACAGCTC CTACCGCGCG GCGCTCGCGT CCAACTTCGC CAACGGCTGG GCGGTGTTCG GCCTGCGCGT GTCGATGGTG CCGCTGTTCG TGGAGAAGGC GCTGCACGGC TCGCCCGAGA TGGGCGGCAT CTCGATGTCG GTGTTCGCGG TCGGCAACGT GTGCACGCTC ATGGTGTCCG GCAAGCTCTC CGACCGGATC GGCCGCAAGC CGCTCGGCAT CGCGGGCCTG GCCATCTCCG CCGCGGGCAC CCTGTGGTTC GGCTTCAGCA CGACCGTGCC GGTCTTCCTG GTCGCCTCGT TCGTGGCAGG CCTCGGCGCG GGCCTGCTGA ACCCGCCGCA GAACGCGGTC GTCGCCGACG TCATCGGCCC CAAGGGCAAG GGCGGGCCGC TGCTCGCCAC GTTCCAGGTG ATCGCCGACC TCGGCGCCAT CGTCGGGCCG CTGCTGGCGG GCCTGCTCGC GGACAACTTC TCCTACACGA CGGCGTTCAC CGTGACCTCC GGCATCATGG TCGTCGCCCT GCTGATGTGG ATCACCATGC CGGAGACGCT GGTGAAGGAG AGCACGACCG CGGAGACCGT CGCCGTCGAG TCGGGCACCC TGGACGAGGG GCCGGAGGTG CCCACCGGGG AGCGCGTCGC CGGACGTCCC AGGCAACCAG AGGCCTAG
|
Protein sequence | MLGRTTERTA QRLPAEVWVL VVASFIIAIG FGIVAPALPI FADSFGVGST AVALVISSFA VVRILFAPVS AKLVTRFGEP KTYIAGIVIV ALGTAACGFA VTYWQLLFLR AFSGIGSTMF TVASVGLLIR ITPPAQRGQA TGLWSTGFLL GNIFGPIIGA ALVGVSVQLP FVSYAAALLV AATFVWWFLR KSTLAALDTS ARPESPVTVR QALRNSSYRA ALASNFANGW AVFGLRVSMV PLFVEKALHG SPEMGGISMS VFAVGNVCTL MVSGKLSDRI GRKPLGIAGL AISAAGTLWF GFSTTVPVFL VASFVAGLGA GLLNPPQNAV VADVIGPKGK GGPLLATFQV IADLGAIVGP LLAGLLADNF SYTTAFTVTS GIMVVALLMW ITMPETLVKE STTAETVAVE SGTLDEGPEV PTGERVAGRP RQPEA
|
| |