| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0951 |
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| Symbol | |
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| ID | 8325121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1056385 |
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| End bp | 1058703 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644941496 |
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| Product | ATP-dependent helicase HrpB |
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| Protein accession | YP_003098756 |
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| Protein GI | 256375096 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1643] HrpA-like helicases |
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| TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGTTGC CAGATCTTCC GGTCCGAGCG GTGCTGCCCG AGCTGATCGA GACCCTGTCC
GGGTGGGGCG CGGCCGTGCT GGTCGCGCCG CCGGGCACGG GCAAGACCAC CCTGGTGCCG
CTGGCGCTGG AGGGCCGGGT GGTGATCGCC GAGCCGCGCC GGATCGCCGC GCGGGCGGCG
GCGTCGCGCA TGGCCGCGCT GCTGGGCGAG CCGGTGGGGG CGACGGTCGG GTACTCGGTG
CGCGGCGACC GGAAGGTGTC GAGGTCGACC AGGATCGAGG TGGTGACCTC GGGGCTGCTG
GTGCGCAGGT TGCAGCACGA CCCGGAGCTG TCGGGTGTGG GCACGGTGGT GCTGGACGAG
TGCCACGAGC GGCACCTGGA CGCGGACCTG CTGCTCGCGC TGCTCCTGGA CGCCCGCGCG
GGGCTGCGCC CGGACCTGCG GCTGCTGGCG ACGTCGGCGA CGGTCGCGGC GGACCGCCTC
GCGGAGCTGA TGGGCGGCGT CCCGGTGCTG ACCGCGCACG CCAGGACCTA CCCGGTGGAG
CTGTTCCACG TCCCGCCGCA GAAGAACGAG CGGTCGGAGG CTGTGGTGGC CCGCGCGATC
CGGCGGGCGG TGGCGGAGAC GCCGGGCGAC GTGCTGGTGT TCCTGCCCGG TGTGCCGGAG
ATCCGCCGGG TGGCGGCCCT GTTCCAGGGC GGTGACCTGC GCGTGGACGT CCTGCACGGC
CGCTTGACGG CGGCCGAGCA GGACGCGGTG CTGCGGGTGG GGCGGGAGCA GCGGGTGCTG
CTGTCGACGT CGATCGCCGA GTCGAGCCTG ACCGTGCCGG GTGTGCGCGC CGTGGTGGAC
GCGGGCCTGT CGCGGGTGCC GAGGGTGGAC CACCGCAGGG GGTTGGCGGG GCTGGCGACC
GTGCGGGTGA GCGCGGCCGT GGCGGACCAG CGCGCGGGCC GGGCCGGGCG GGAGGCGCCG
GGGCGGGCGT ACCGGTGCTG GCCGGAGCAC GAGCAGTCCA CGCTGCCGCG CTACCCGGAG
CCGGAGATCC GCAGCGCGGA CCTGACGTCG CTGGCGCTGG AGCTGGCGTG CTGGGGGACG
CCGGACGGCG AGGGTCTGTC CTGGTGGGAC GCGCCGCCGA GGGGTGCGCT GGAGGCGGCG
AAGGCGGTGC TGGGGAACCT GGGGGCGTTG CGGGACGGCC GGGTGACCGA GCGCGGTGAG
CGGATGTCCG CGCTGGGCCT GCACCCGAGG TTGGCGAGGG CGCTGCTGGA CGGCGGTGAG
CTGGCCGGGT CGAGGACGGC GACCGAGGTG GTGGCGATCC TGGACGAGGA CCGGGGTTCG
GGCGAGGACA TCACCGGTCG CAGCGCGGAC CGGCGGGAGG TGGGCAGGCT GTCGAAGCTG
ATCCCCGCGG CGTCCGGCAG CGGCGACCAG GCGCTGGTGG TGGCGCTGGC GCACCCGGAG
CGCCTGGCCC GCAGGCGCGC GCCGGGCAGC CCGGTGTACC TGATGGCGGG TGGGACGGCG
GCGGAGCTGC CGCAGGGCAG CCGGTTGGCG GACGCGGAGT GGCTGGCGAT CGCGGTGGCG
GACCGCGAGC CGGGGCGCAT CCACGCGCGG ATCAGGTTGG CGGCGCGGGC GGACGAGCAG
CTGGCCGTGC AGGCGGCGCC CGCGCTGCTC GGGGAGCGGG AGGAGATCGC GTGGGACGGC
GACGTGGTGG CGCGGCGGGT GCGGCACCTG GGCGCGATCC CGCTGTCGAC GACCCAGCTG
ACCGGCACGG CGCACCTTCA GCAGGCGCTG CGGGCGGGTT TGGCGGCGGA GGGTCTGGGG
TTGCTGTCGT GGGGACCTGC GGCAGTCCGA ACCAGGCAGC GGTTGGCTTT CCTGCACGAG
GTGCTGGGAG ATCCGTGGCC GGAGGTGACC GATGCGGCGC TGCTGCCCTT GGTGGACCTG
GGCAACGCCC GCCGCAAATC CGACCTGGCG AAGCTGAAAG CCGACCACGT GCTGCAGGCG
GCGATGCCGT GGCCTGCGGC GGCGAAGTTC GACGCCCTGG CCCCGGACCG CTTGGAGGTC
CCGTCGGGTT CGAGGATCGC CATCGACTAC TCGACCACCC CGCCGACCTT GCCGGTGAAG
GTGCAGGAGG TGTTCGGCTG GACGGAAACG CCGACGGTCG CCGGAATTCC CCTGGTGCTG
CACCTGCTCA CCCCGGCGGG CCGTCCGACG GCGGTGACGG GCGACCTGAA GTCGTTCTGG
CAGACGGGCT ACCCGCAGGT GAGAGCGGAA CTACGAGGCC GCTACCCGAA GCACCGCTGG
CCGGAGGACC CGATGACGGC GCCGCCGGCT CGGCGGTGA
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| Protein sequence | MELPDLPVRA VLPELIETLS GWGAAVLVAP PGTGKTTLVP LALEGRVVIA EPRRIAARAA
ASRMAALLGE PVGATVGYSV RGDRKVSRST RIEVVTSGLL VRRLQHDPEL SGVGTVVLDE
CHERHLDADL LLALLLDARA GLRPDLRLLA TSATVAADRL AELMGGVPVL TAHARTYPVE
LFHVPPQKNE RSEAVVARAI RRAVAETPGD VLVFLPGVPE IRRVAALFQG GDLRVDVLHG
RLTAAEQDAV LRVGREQRVL LSTSIAESSL TVPGVRAVVD AGLSRVPRVD HRRGLAGLAT
VRVSAAVADQ RAGRAGREAP GRAYRCWPEH EQSTLPRYPE PEIRSADLTS LALELACWGT
PDGEGLSWWD APPRGALEAA KAVLGNLGAL RDGRVTERGE RMSALGLHPR LARALLDGGE
LAGSRTATEV VAILDEDRGS GEDITGRSAD RREVGRLSKL IPAASGSGDQ ALVVALAHPE
RLARRRAPGS PVYLMAGGTA AELPQGSRLA DAEWLAIAVA DREPGRIHAR IRLAARADEQ
LAVQAAPALL GEREEIAWDG DVVARRVRHL GAIPLSTTQL TGTAHLQQAL RAGLAAEGLG
LLSWGPAAVR TRQRLAFLHE VLGDPWPEVT DAALLPLVDL GNARRKSDLA KLKADHVLQA
AMPWPAAAKF DALAPDRLEV PSGSRIAIDY STTPPTLPVK VQEVFGWTET PTVAGIPLVL
HLLTPAGRPT AVTGDLKSFW QTGYPQVRAE LRGRYPKHRW PEDPMTAPPA RR
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