Gene Amir_0894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0894 
Symbol 
ID8325058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp985902 
End bp986837 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content72% 
IMG OID644941436 
Productproline iminopeptidase 
Protein accessionYP_003098701 
Protein GI256375041 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR01249] proline iminopeptidase, Neisseria-type subfamily 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACCCCG AGATCGAGCC CCACGAGCAG GGCCTGCTGG ACGTCGGCGA CGGGAACCTC 
GTGCACTGGG AGGTGAGCGG GAACCCGGAG GGCAAGCCCG TCGTGTTCCT GCACGGTGGA
CCCGGTGGCG GGTGCTCGCC CGCGCACCGG CGGCTGTTCG ACCCCGCCGC CTACCGGATC
GTGCTGTTCG ACCAGCGCGG GTGCGGGCGG TCGACCCCGC ACGCCAGCGA GAACCCCGAC
CTGACCGCCA ACACGACCTG GCACCTCGTC GCCGACATGG AGAAGCTCCG GGAGCACCTC
GGGATCGAGC GGTGGCAGGT GTTCGGGGGG TCCTGGGGGA GCACGCTCTC GCTCGCCTAC
GCGCAGACCC ACCCCGAGCG GGTCACCGAG CTGGTGCTGC GCGGGATCTT CACCGTCCGG
AAGAAGGAGC TGGACTGGTA CTACGGCGGC GGCGCCGGGA TGCTGTTCCC CGAGCTGTGG
GAGCAGGTCG CGCGCTGGGC CCCGGACGGG GACGTCATCG GCACGTACTC GCGGCTGCTG
AACGACCCCG ATCCCGCCGT GCACGAGGCC CCGGCGATCG CGTGGAGCGT GTGGGAGGGG
TCCACGGTCA CGCTGCTGGA GCGCGCGGAC CTGACCGCCT CGTTCGCCGA GCCCCGGTTC
GCGCTCGCGT TCGCCCGCAT CGAGAACCAC TACTTCGTCC ACGGCGCCTG GCTGGAGGAG
GGGCAGCTCA TCCGGGACGC GCACAAGCTC TCCGGCATCC CCGGCGTGAT CGTGCAGGGG
CGCTACGACA TGGCCACCCC GCCGGTCACC GCCTGGGAGC TGCACAAGGC GTGGCCCGGT
TCGGAGCTGG TGATGGTCGG GGACGCCGGG CACGCGTTCG ACGAGCCCGG CATCCTCAAG
GCGCTCGTCG AGGCCACCGA CCGGTTCCGC CCCTAG
 
Protein sequence
MYPEIEPHEQ GLLDVGDGNL VHWEVSGNPE GKPVVFLHGG PGGGCSPAHR RLFDPAAYRI 
VLFDQRGCGR STPHASENPD LTANTTWHLV ADMEKLREHL GIERWQVFGG SWGSTLSLAY
AQTHPERVTE LVLRGIFTVR KKELDWYYGG GAGMLFPELW EQVARWAPDG DVIGTYSRLL
NDPDPAVHEA PAIAWSVWEG STVTLLERAD LTASFAEPRF ALAFARIENH YFVHGAWLEE
GQLIRDAHKL SGIPGVIVQG RYDMATPPVT AWELHKAWPG SELVMVGDAG HAFDEPGILK
ALVEATDRFR P