Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0879 |
Symbol | |
ID | 8325042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 969735 |
End bp | 970877 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644941421 |
Product | protein of unknown function DUF34 |
Protein accession | YP_003098686 |
Protein GI | 256375026 |
COG category | [S] Function unknown |
COG ID | [COG0327] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00486] dinuclear metal center protein, YbgI/SA1388 family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACCC TCGGCGAGGT GCTCGCCGCG CTGGAGGCGG CCTACCCGCC CGCCACCGCC GAGTCCTGGG ACGCGGTCGG CCTGGTGTGC GGCGACCGCT CCGAACCGGT GTCCAAGGTG CTGTTCTGCG TGGACCCGGT CGAGTCCACG GTGGACGAGG CGATCGAGGT GGGCGCCCAG CTGCTCGTCT CGCACCACCC GCTGCTGCTG CGCGGCGTCC ACGGCGTGCC CGCCGACACC CCCAAGGGCC GCCTCGTGCA CCGCCTGATC CGCGCGGGCG CGGCCCTGTA CACGGCGCAC ACCAACGCCG ACACCGCGAA CCCCGGCGTG TCCGACGCGC TGGCCCGCGC CATCGGCCTG GAGGTCACCG GCCCGCTCGA CCCGGCCCCG GCCCGCGCGC TGGACGTGCT CACCACCTAC GTCCCGGTCG CCGACGCCGC GAAGGTCCTG GCCGCGCTGC ACGACGCGGG CGCGGGCAGC ACCGGCGACT ACCGCGAGGT CGCCTGGAGC GTCGACGGCA CCGGCCAGTT CCGCCCCGTC GAGGGCGCGA ACCCGGCGGT CGGCGTGGTC GGCGAGCTGG AGCGCCTGCC CGAGACCCGG CTCGAACTCG TGCTGCCGCG CGGGCGCCGC GCCGACGTCG TGCGGGCCCT GCGCGCCGCG CACCCGTACG AGGAAGTCGC CTTCAACCTC AACGAGATCC CCGAGCTGCC CGCCGACACC GGCATCGGCC GGATCGGCGT GCTCCCGGAG CCCGAGCCGC TCAGCGCGTT CACCCGCCGC GTCGCCGCCG CCCTCCCCGC CACCGCGTGG GGCGTGCGCT CGGCGGGCGA CCCGGATCGG GTGATCGGCA CCGTCGCGGT GTGCGGCGGC GCGGGCGACA GCCACCTGTC CGCCGCGACG CGCGCGGGCG TGGACGCCTA CGTCACCGCC GACCTGCGGC ACCACCCCGC CCGCGAGCAC CTGGACGCGG GAGGGCCCGC CCTCGTCGAC GTCGCCCACT GGGCCAGCGA ATGGCCGTGG TGCGCGCAGG CGGCCGACAT CGTGCGCGCC GCCTTCGGCG GTACGGTCGA AACCCTCGTC TCGACCCGAC GGACCGACCC CTGGACCACC GGCGCGACGA GCCCCGAACA GGAGGACCGC TGA
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Protein sequence | MTTLGEVLAA LEAAYPPATA ESWDAVGLVC GDRSEPVSKV LFCVDPVEST VDEAIEVGAQ LLVSHHPLLL RGVHGVPADT PKGRLVHRLI RAGAALYTAH TNADTANPGV SDALARAIGL EVTGPLDPAP ARALDVLTTY VPVADAAKVL AALHDAGAGS TGDYREVAWS VDGTGQFRPV EGANPAVGVV GELERLPETR LELVLPRGRR ADVVRALRAA HPYEEVAFNL NEIPELPADT GIGRIGVLPE PEPLSAFTRR VAAALPATAW GVRSAGDPDR VIGTVAVCGG AGDSHLSAAT RAGVDAYVTA DLRHHPAREH LDAGGPALVD VAHWASEWPW CAQAADIVRA AFGGTVETLV STRRTDPWTT GATSPEQEDR
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