Gene Amir_0879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0879 
Symbol 
ID8325042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp969735 
End bp970877 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content77% 
IMG OID644941421 
Productprotein of unknown function DUF34 
Protein accessionYP_003098686 
Protein GI256375026 
COG category[S] Function unknown 
COG ID[COG0327] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00486] dinuclear metal center protein, YbgI/SA1388 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCACCC TCGGCGAGGT GCTCGCCGCG CTGGAGGCGG CCTACCCGCC CGCCACCGCC 
GAGTCCTGGG ACGCGGTCGG CCTGGTGTGC GGCGACCGCT CCGAACCGGT GTCCAAGGTG
CTGTTCTGCG TGGACCCGGT CGAGTCCACG GTGGACGAGG CGATCGAGGT GGGCGCCCAG
CTGCTCGTCT CGCACCACCC GCTGCTGCTG CGCGGCGTCC ACGGCGTGCC CGCCGACACC
CCCAAGGGCC GCCTCGTGCA CCGCCTGATC CGCGCGGGCG CGGCCCTGTA CACGGCGCAC
ACCAACGCCG ACACCGCGAA CCCCGGCGTG TCCGACGCGC TGGCCCGCGC CATCGGCCTG
GAGGTCACCG GCCCGCTCGA CCCGGCCCCG GCCCGCGCGC TGGACGTGCT CACCACCTAC
GTCCCGGTCG CCGACGCCGC GAAGGTCCTG GCCGCGCTGC ACGACGCGGG CGCGGGCAGC
ACCGGCGACT ACCGCGAGGT CGCCTGGAGC GTCGACGGCA CCGGCCAGTT CCGCCCCGTC
GAGGGCGCGA ACCCGGCGGT CGGCGTGGTC GGCGAGCTGG AGCGCCTGCC CGAGACCCGG
CTCGAACTCG TGCTGCCGCG CGGGCGCCGC GCCGACGTCG TGCGGGCCCT GCGCGCCGCG
CACCCGTACG AGGAAGTCGC CTTCAACCTC AACGAGATCC CCGAGCTGCC CGCCGACACC
GGCATCGGCC GGATCGGCGT GCTCCCGGAG CCCGAGCCGC TCAGCGCGTT CACCCGCCGC
GTCGCCGCCG CCCTCCCCGC CACCGCGTGG GGCGTGCGCT CGGCGGGCGA CCCGGATCGG
GTGATCGGCA CCGTCGCGGT GTGCGGCGGC GCGGGCGACA GCCACCTGTC CGCCGCGACG
CGCGCGGGCG TGGACGCCTA CGTCACCGCC GACCTGCGGC ACCACCCCGC CCGCGAGCAC
CTGGACGCGG GAGGGCCCGC CCTCGTCGAC GTCGCCCACT GGGCCAGCGA ATGGCCGTGG
TGCGCGCAGG CGGCCGACAT CGTGCGCGCC GCCTTCGGCG GTACGGTCGA AACCCTCGTC
TCGACCCGAC GGACCGACCC CTGGACCACC GGCGCGACGA GCCCCGAACA GGAGGACCGC
TGA
 
Protein sequence
MTTLGEVLAA LEAAYPPATA ESWDAVGLVC GDRSEPVSKV LFCVDPVEST VDEAIEVGAQ 
LLVSHHPLLL RGVHGVPADT PKGRLVHRLI RAGAALYTAH TNADTANPGV SDALARAIGL
EVTGPLDPAP ARALDVLTTY VPVADAAKVL AALHDAGAGS TGDYREVAWS VDGTGQFRPV
EGANPAVGVV GELERLPETR LELVLPRGRR ADVVRALRAA HPYEEVAFNL NEIPELPADT
GIGRIGVLPE PEPLSAFTRR VAAALPATAW GVRSAGDPDR VIGTVAVCGG AGDSHLSAAT
RAGVDAYVTA DLRHHPAREH LDAGGPALVD VAHWASEWPW CAQAADIVRA AFGGTVETLV
STRRTDPWTT GATSPEQEDR