Gene Amir_0876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0876 
Symbol 
ID8325039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp967621 
End bp968277 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content79% 
IMG OID644941418 
ProductHNH nuclease 
Protein accessionYP_003098683 
Protein GI256375023 
COG category[V] Defense mechanisms 
COG ID[COG1403] Restriction endonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTCGA ACCCGCAAGA CCCGCTCGCC GCCGCGCTGG GGATGCTGAC CCTCCTCGCG 
GCGGCGCTCC TGCTGCTGGC GCTGGCCTCC TTCGCCCTGC GCCGCCCGCC CCCGAACCCG 
GCGTTCACCC GCCGCCCGCC GCACGGCGGC GGGGCCCTGC GCCCCGACCC GAACGCGGGC 
TTCCTCACCG ACCGCGGCCT GCTCTTCCTG CCCCGCCGCT TCTTCCTGGC CACCGGCTGC 
CCGCCGGTCC GCGTCCGGGC CCGCGACCAC GCCGCGCTGG ACCGGGCCCG CCGCACCCGC 
CCGGTGAAGG TCGCGCAGCG CGGCCGGGCC TCCTGGTGGT GGTTCGAGGA CGCCGTCTAC 
GCCGAGTCGC GCGGCTACCG CCCGGCCGAC GTGCTGGCCC GCGTGGTCGC CGAGCGGGCC 
AGGGGGGAGG CGCTGGCCGA GCGCACCCTG CTGCTGACCT CGCTCAACCC CCGCCACCCG 
CGCATCCCCG CCGAGGTGCG CCGCGCCGTG TTCGAGCGGG ACCGGGGCCG CTGCGCGCAC 
TGCGGCGGCG CCACGGACCT CAACTACGAC CACGTCGTCC CGCTCGCCGA GGGCGGCCCG 
TCCACGGTCG GCAACCTGCG CGTCCTGTGC CGCCCGTGCC TGCGCATCGC GCACTGA
 
Protein sequence
MPSNPQDPLA AALGMLTLLA AALLLLALAS FALRRPPPNP AFTRRPPHGG GALRPDPNAG 
FLTDRGLLFL PRRFFLATGC PPVRVRARDH AALDRARRTR PVKVAQRGRA SWWWFEDAVY 
AESRGYRPAD VLARVVAERA RGEALAERTL LLTSLNPRHP RIPAEVRRAV FERDRGRCAH 
CGGATDLNYD HVVPLAEGGP STVGNLRVLC RPCLRIAH