Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0875 |
Symbol | |
ID | 8325038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 967010 |
End bp | 967468 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 644941417 |
Product | protein tyrosine phosphatase |
Protein accession | YP_003098682 |
Protein GI | 256375022 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.897131 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCTCCG TGGTGTTCGT GTGCACCGGC AACATCTGCC GATCCCCCGT GGCGGAGATC GTGCTCCGGG AGCACCTGCG CCGGGCTGGG GTCGAGGGCG TGGTGGTGTC GAGCGCGGGC TTGCAGGGCT ACCACGTGGG CGAGCCCGCC GACGAGCGGA GCGCGGCGAC GCTGGAGCGG GCCGGGTACC CGACCGGGCA CGTGGCCGCG AAGGTGAGCG CCGAGGACCT GGACGCGGAC CTGCTGGTGG CGCTGGACTC CGGGCACGCG CGGGCGCTGC GCGGGGTAGT CGCGGACCCG GAGCGGGTGC GGCTGCTGCG GTCGTTCGAC CCGGAGGCCG GGTCGGCCGA GGTGCCGGAC CCGTACTACT CGGGGCGGGC GGCGTTCGCC GAGGTGCTGG GGATGGTCGA GGCGGCGGTG CCGGGGCTGC TGCGGTGGGT GCGGGAGCGG CAGCGGTGA
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Protein sequence | MLSVVFVCTG NICRSPVAEI VLREHLRRAG VEGVVVSSAG LQGYHVGEPA DERSAATLER AGYPTGHVAA KVSAEDLDAD LLVALDSGHA RALRGVVADP ERVRLLRSFD PEAGSAEVPD PYYSGRAAFA EVLGMVEAAV PGLLRWVRER QR
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