Gene Amir_0875 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0875 
Symbol 
ID8325038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp967010 
End bp967468 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content76% 
IMG OID644941417 
Productprotein tyrosine phosphatase 
Protein accessionYP_003098682 
Protein GI256375022 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.897131 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCTCCG TGGTGTTCGT GTGCACCGGC AACATCTGCC GATCCCCCGT GGCGGAGATC 
GTGCTCCGGG AGCACCTGCG CCGGGCTGGG GTCGAGGGCG TGGTGGTGTC GAGCGCGGGC
TTGCAGGGCT ACCACGTGGG CGAGCCCGCC GACGAGCGGA GCGCGGCGAC GCTGGAGCGG
GCCGGGTACC CGACCGGGCA CGTGGCCGCG AAGGTGAGCG CCGAGGACCT GGACGCGGAC
CTGCTGGTGG CGCTGGACTC CGGGCACGCG CGGGCGCTGC GCGGGGTAGT CGCGGACCCG
GAGCGGGTGC GGCTGCTGCG GTCGTTCGAC CCGGAGGCCG GGTCGGCCGA GGTGCCGGAC
CCGTACTACT CGGGGCGGGC GGCGTTCGCC GAGGTGCTGG GGATGGTCGA GGCGGCGGTG
CCGGGGCTGC TGCGGTGGGT GCGGGAGCGG CAGCGGTGA
 
Protein sequence
MLSVVFVCTG NICRSPVAEI VLREHLRRAG VEGVVVSSAG LQGYHVGEPA DERSAATLER 
AGYPTGHVAA KVSAEDLDAD LLVALDSGHA RALRGVVADP ERVRLLRSFD PEAGSAEVPD
PYYSGRAAFA EVLGMVEAAV PGLLRWVRER QR