Gene Amir_0865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0865 
Symbol 
ID8325028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp952917 
End bp953876 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content76% 
IMG OID644941407 
ProductNUDIX hydrolase 
Protein accessionYP_003098672 
Protein GI256375012 
COG category[L] Replication, recombination and repair 
COG ID[COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGTTCG AGCTGGTCGA GCTGCCCTCG CTGTCCCGGT TCACGGTCGA CCGGTCGGAG 
CCGCTGCGCG GCGACGCCGA GCGGCTGCGC GCCGGGTGGC CGCAGGCGAA GGTGCTCGTG
ATCGACCGCA AGGGGCGCGC GAAGGTCGGC GGGCGCGGGA AGCTGCTGGT GCGGCGGCCC
GCCCCGGAGT TCGGCGACAC CCCGCCGGAC GACGCGGTCT TCCTCGGCGA GGAGGAGGGC
GTCGCGCACT GGGCGGTGCC GCTGGCCGAC GACGAGACCG ACGTCTCGGC GCCCGCCACG
CGCGGGCGGT CCTGGTTCGG CGGCGAGCTG GGCGAGGAGC CCGAGTGGCT CGACCTGCGC
GCCGTGGGCG CCCTGCTGGA CGACACCGGC GCGGGCCTGT TCACCTCGGC GGTGGCGCTG
TTCCACTGGC ACCGCTCCGC GCGGTTCTGC GCGGTGTGCG GCGGCGCCAC CAGGTCGGTC
AAGGCCGGTT GGGCGCGGGA GTGCTCGGCG TGCGGGCGCG AGGAGTACCC GCGCACCGAC
GCCGCGGTGA TCTGCCTGGT GCACGACGGC GCGGACCGGG TCCTGCTGGC GCGCGGCGAG
GGCTGGCCCG AGGGGCGGTA CTCGGTGCTC GCCGGGTTCG TCGAGGCCGG TGAGTCGCTG
GAGTCCTGCG TGGGCCGCGA GGTGCTGGAG GAGGTCGGGG TGCGGGTGTC CGACATCCGC
TACCTGGGCA GCCAGCCGTG GCCGTTCCCG AGGTCGCTGA TGGTGGCCTT CCACGCGGTG
GCCGACCCCG GCACGCCGCT GGCGCCCGCC GACGGGGAGA TCGCCGAGGC CAAGTGGGTG
GAGCGGTCGG TCGTGGCGAA GGCGCTGGCC GCGCCGGGCA GCGTCCCGGA CCTGCTGCTC
GCGCCCGGCG CGTCGATCGC CTACCGGATG ATCCAGTCCT GGGTGGCGGC CGGGGGCTGA
 
Protein sequence
MTFELVELPS LSRFTVDRSE PLRGDAERLR AGWPQAKVLV IDRKGRAKVG GRGKLLVRRP 
APEFGDTPPD DAVFLGEEEG VAHWAVPLAD DETDVSAPAT RGRSWFGGEL GEEPEWLDLR
AVGALLDDTG AGLFTSAVAL FHWHRSARFC AVCGGATRSV KAGWARECSA CGREEYPRTD
AAVICLVHDG ADRVLLARGE GWPEGRYSVL AGFVEAGESL ESCVGREVLE EVGVRVSDIR
YLGSQPWPFP RSLMVAFHAV ADPGTPLAPA DGEIAEAKWV ERSVVAKALA APGSVPDLLL
APGASIAYRM IQSWVAAGG