Gene Amir_0862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0862 
Symbol 
ID8325025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp949248 
End bp950123 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content74% 
IMG OID644941404 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003098669 
Protein GI256375009 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0771679 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACA CCCGAGTCCG TCACCGCTAC GCCACCGTCG ACGGGAGGCG GCTCTTCTAC 
CGGGAGGCCG GCGACCCGGT CAAGCCCGCC GTCGTGCTCC TGCACGGCTT CCCGACCAGC
TCGTCCATGT ACCGCGACCT GATCCCCGCT CTCGCCGCCG ACCACCACGT GATCGCCCCC
GACCACCTCG GCTTCGGCCT GTCCGACGCC CCGCCGGTCA CCGAGTTCGA CTACACCTTC
GACGCCCTCG CCGACCTCAC CGCCGCCCTG CTCGCCCGGC TCGGCCTCAC CCGGTACGCG
ATCGTCGTGC AGGACTACGG CGCCCCCGTC GGCTGGCGGC TGCTGCTGCG CGACCCGGCC
GCGATCACCG CCGTGATCAC CCAGAACGGC AACGCCTACG AGGAGGGCCT GGTCCCGGAG
TTCTGGGGCC CGGTCGCCGA GTACTGGCGC GAGCGCACCC CGGAGACCGA GGCGGGCGTG
CGCGCCGCGC TCACCGAGGA GGCCATCCGC TGGCAGTACC TCACCGGCGC GCCGGACCCG
GAGCTGGTCG ACCCCGCCAC CTGGCGGCGC GACCACGCCC TCGTCTCCCG CCCCGGCAAC
GACCTGGCGC AGCTGTCCCT GTTCGCCGAC TACGCCACCA ACGTCGCCCT CTACCCCCGG
CTGCACGAGG TGTTCCGCGC GACGCGGGTC CCGCTGCTGG CCGTCTGGGG CGAGCACGAC
GAGATCTTCG GACCGGCGGG CGCCCGCGCG TTCGCCACCG ACCTGCCGGA CGCCGAGATC
CACCTGCTCG ACGGCGGCCA CTTCCTCCTG GAGACCGCCG CCGCCGAGGT CGCGCCCCTG
GTCCTGCGCT TCCTCGCCGA GCGCGTCCCG GCCTGA
 
Protein sequence
MTDTRVRHRY ATVDGRRLFY REAGDPVKPA VVLLHGFPTS SSMYRDLIPA LAADHHVIAP 
DHLGFGLSDA PPVTEFDYTF DALADLTAAL LARLGLTRYA IVVQDYGAPV GWRLLLRDPA
AITAVITQNG NAYEEGLVPE FWGPVAEYWR ERTPETEAGV RAALTEEAIR WQYLTGAPDP
ELVDPATWRR DHALVSRPGN DLAQLSLFAD YATNVALYPR LHEVFRATRV PLLAVWGEHD
EIFGPAGARA FATDLPDAEI HLLDGGHFLL ETAAAEVAPL VLRFLAERVP A