| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0852 |
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| Symbol | |
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| ID | 8325015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 937928 |
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| End bp | 941080 |
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| Gene Length | 3153 bp |
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| Protein Length | 1050 aa |
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| Translation table | 11 |
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| GC content | 77% |
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| IMG OID | 644941394 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_003098659 |
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| Protein GI | 256374999 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.986974 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCTCCCA ACAGGACCCC TCTCCTGGTC CGAGGCCCTT CGGACCCCCG GCCCGTCCCC
ACCTGGGACG CGGCCTCCCG CCGCGTGCTG GAGCACCCCG GCGGGCCGCT GCGCGTGCTG
GGCGGTCCCG GCACGGGCAA GACGACGCTG ATCGCCGAGA CCGCCGCCCG CAGGGTGCAC
GCGGGGGCGG CTCCGGAGAG CGTGCTGGTG CTGACCGCGA ACCGGCGGGC CGCCGAGTCC
CTGCGCGCCC ACCTGACCGC GCTGATCCGC CGCACCCCGG ACGGCGAGCT GCTGCCCGTG
GTGCGCGAGC CGCTGGTGCG CACCGTGCAC TCGTACGCGT TCGCGGTGCT GCGGGCCCGC
GCGGTGCGGG ACGGGGAGCC GCCGCCCCGG CTGCTGGCCG GGCCCGAGCA GGACGCCGTG
GTGCGCGAGC TGATCACCGG CGACGTGGAG GCGGGCGCGC GGGACTGGCC GGAGCGGCTG
CGGCCCGCGC TGGCCCTGCC GGGGTTCGCC GGGGAGCTGC GGGACCTGCT GCTGCGCGCG
GTCGAGCGCG GGCTGGCCCC CGAGGACCTG GTGGCGCTGG GCGAGGGGCA CGGGCGCGAC
GAGTGGGTGG CGGCCGGGCT GTTCGGCGAG CAGTACGAGC AGGTGTCGCT GCTGGCCTCG
CAGGGCCTCG CGCCCGCCTA CGACGCGGCC GAGCTGGTGG ACAACGCGCT GCTGGCGTTC
GAGAACGACG AGGAGCTGCT GTCCGGCGAG CGGGCGCGCG TGCGGCACGT GTACGTGGAC
GACGCCCAGC ACCTGGACCC GCTGCAGCAC GCCCTGATCC GCGCGGTCGG GTCGGCGGCG
GACGAGTTCC TGCTGTTCGG CGACCCGGAC CAGGCGGTGT TCTCGTTCCG GGGGGCCGAT
CCGAGGCTGC TCGTGGACGG CGACAGCCCG CAGGTCGTGC TCTCCCGCAG CCACCGGCTG
CCGTCGGCGG TGCGCGCCGC CACCGCCGGG CTCGCCTCGC GGCTGCCGGG CGCCTCGCCC
GCGCGCGAGG TCTCCCCGGT CGGCGAGGGC GGCACGACGC AGGTGCGGCT GTTCGCGTCC
GAGGCGCAGG AGGCGTCCTG GGTGGCCGAC CGGTTGCGCC GCGCGCACCT GGTCGACGGG
GTGCCGTGGT CGCGGATGGC GGTGGTGGTG CGGTCGGCGA CCAGGTCGCT GCCGGTGATC
CAGCGCGCCC TGCTCGCGGC GGGCGTCCCG GTGGCGGTGC CGGGCACGGA CCTGCCGCTG
GCCCGCCAGC CCGCCGTGAC GCCGCTGCTG GCGCTGCTGC GCTGCGCGGC CGTGCCGGGG
TCGCTGGACG AGGACACGGC CGCGATGCTG CTGTCCTCCC CGCTCGGCGG GGCCGACCCG
CTGGCGCTGC GCCGGTTGCG GCGGGGCCTG CGCAGGCTGG AGATCGCGGC GGGCCGGGAC
CGGCCGAGCG GCGAGCTGCT CGTGGAGGTG ATCGAGGACC GGGACCGGCT GGCCGCGCTG
GAGGACGCCG AGTCCGCGCC CGCCCGGCGC GTGGCCCGGC TGCTGCGCAC CGCCCGCGAC
AGCATCAGGC GCGGGTCCAG CGTCGAGGTC GTGCTGTGGG ACCTGTGGCA GGACACGGGG
CTGCAGGACC GGTGGGTGGC GATGTCCTCG CGGCACGGCA CCACCGGGAT GCAGGCCGAC
CGGGACCTGG ACGCGGTCGT GGCGTTGTTC GAGACCGCCG CCAAGTACGT GGACCGGCTG
CCGGGCGCGT CGCCGGACGG GTTCGCCGAC TACCTGGAGG CGCAGCACAT CGTCGGCGAC
ACGCTGGCCG CCGCGGCGCC CGTCGGCGAG GCCGTGGCGG TGCTGACCGC GCACGCGTCG
GCCGGGCAGG AGTGGGAGGT CGTGGCGGTG CCGGGCGTGC AGGAGGGCAC GTGGCCGGAC
CTGCGGCTGC GCGGGTCGCT GCTGGGCGTG GAGCGGTTGG TGGACCTGGT GTCCGGGGTC
GGCGCGGGCG CGTCGGCCGT GGCGCCGCTG CTGGCCGAGG AGCGCAGGCT GCTGCTCGTG
GCGACCAGCC GGGCGCGGCG GGTGCTGCTG GTGAGCGCGG TGCGCGGCGA GGACGCCCAG
CCGTCCCGGT TCCTGGACGA GCTGGAGGAC GCGGGCGAGG GCGAGACCGA GCGGCGGATC
ACCCCGCCGG AGCGGGGGCT GGTGCTGGCC GAGCTGGTCG GCGAGCTGCG GCGGGTGGTG
TGCGATCCGG GCGAGAGCGA GGACCGCAGG GACCGGGCGG CGACCCAGCT GGCCAGGTTG
GCGGCCGACG GGGTGCCGGG GGCGCACCCG GACACCTGGT ACGGGTTGGC GCCGGTGACC
ACCGACGTGC CGCTGTGGAC CGAGGAGCAC ACCGTGTCGG TGTCGCCGTC CACGGTGGAG
ACGCTGTCGA AGTGCCCGGT GCGGTGGGTG GTCGAGCGGC ACGGCGGGCA GGACCCGGCG
GAGCTGGCGT CGATCACCGG CACGCTCGTG CACGCGCTGG CGCAGGCCGC CGCGTCGGGG
GCGGGCGAGG CGGAGCTGAA GGAGAAGCTG GACGAGGCGT GGACGGCGGT GGACGCGGGG
GCGCCGTGGT TCTCGCGGCG CGAGCGGATG CGGGTGGAGC GGATGCTCGA CGCGTTCCTG
GCGTGGCTGT CGGCCAGCCG GGGGCAGCTG ACGCAGGTGT CGGTGGAGGA GGAGATCTCC
GTCGACCTGC CGAAGGTGGA GGGCGGGCCT CGGCTGAAGG TGCGCGGCCG GGTGGACCGC
CTGGAGACCG ACCGCGACGG CAGGCCGGTG GTGGTGGACA TCAAGACGGC GAAGACGCCG
GTCAGCAGGA AGGACGCGCA GGAGCACCCG CAGCTGGCGG TGTACCAGCT GGCGTCGGCG
CTGGGCGGTT TCACGCACCT GGGCCTGGCG ACCGATCCGG GAGGCGCGGC GCTGCTGTAC
GTGGCGAAGG AGAACAAGAA GACCGGCGCC GCCCAGCTGG AGCAGACGCC GCTGGACGAG
CAGGGGGTGC GGGTCTGGTT GGAGCGGGTG CAGGAGGCGG CGGGGTCGAG CGTGGGGCCG
GGGTACCGCG CGGAGGAGAA CCCGGACTGC GACCGCTGCC CGGCCCGCAC CTCGTGCCCG
GTGCACGCGT CCGGGCGGCA GTTGGGGAAG TGA
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| Protein sequence | MAPNRTPLLV RGPSDPRPVP TWDAASRRVL EHPGGPLRVL GGPGTGKTTL IAETAARRVH
AGAAPESVLV LTANRRAAES LRAHLTALIR RTPDGELLPV VREPLVRTVH SYAFAVLRAR
AVRDGEPPPR LLAGPEQDAV VRELITGDVE AGARDWPERL RPALALPGFA GELRDLLLRA
VERGLAPEDL VALGEGHGRD EWVAAGLFGE QYEQVSLLAS QGLAPAYDAA ELVDNALLAF
ENDEELLSGE RARVRHVYVD DAQHLDPLQH ALIRAVGSAA DEFLLFGDPD QAVFSFRGAD
PRLLVDGDSP QVVLSRSHRL PSAVRAATAG LASRLPGASP AREVSPVGEG GTTQVRLFAS
EAQEASWVAD RLRRAHLVDG VPWSRMAVVV RSATRSLPVI QRALLAAGVP VAVPGTDLPL
ARQPAVTPLL ALLRCAAVPG SLDEDTAAML LSSPLGGADP LALRRLRRGL RRLEIAAGRD
RPSGELLVEV IEDRDRLAAL EDAESAPARR VARLLRTARD SIRRGSSVEV VLWDLWQDTG
LQDRWVAMSS RHGTTGMQAD RDLDAVVALF ETAAKYVDRL PGASPDGFAD YLEAQHIVGD
TLAAAAPVGE AVAVLTAHAS AGQEWEVVAV PGVQEGTWPD LRLRGSLLGV ERLVDLVSGV
GAGASAVAPL LAEERRLLLV ATSRARRVLL VSAVRGEDAQ PSRFLDELED AGEGETERRI
TPPERGLVLA ELVGELRRVV CDPGESEDRR DRAATQLARL AADGVPGAHP DTWYGLAPVT
TDVPLWTEEH TVSVSPSTVE TLSKCPVRWV VERHGGQDPA ELASITGTLV HALAQAAASG
AGEAELKEKL DEAWTAVDAG APWFSRRERM RVERMLDAFL AWLSASRGQL TQVSVEEEIS
VDLPKVEGGP RLKVRGRVDR LETDRDGRPV VVDIKTAKTP VSRKDAQEHP QLAVYQLASA
LGGFTHLGLA TDPGGAALLY VAKENKKTGA AQLEQTPLDE QGVRVWLERV QEAAGSSVGP
GYRAEENPDC DRCPARTSCP VHASGRQLGK
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