Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0821 |
Symbol | |
ID | 8324984 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 899938 |
End bp | 900777 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644941363 |
Product | hypothetical protein |
Protein accession | YP_003098628 |
Protein GI | 256374968 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2887] RecB family exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000666708 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAGGAGC AGCTAGGTCT GGACTTCGGC GCGCCTCCGC GCAAGCTCGT CCGGGTCACC CCCGCCAAGC TGGCCACGTG GGCAGACTGC CCACGCAGGT TCCGCATGGC CTACGTGGAC CGCCCGAGCC CAGGTCGCGG CGGCCCGTGG GCGCACAGCG CCATGGGCGC GGCCGTGCAC AACGCGCTCA AAGCCCTGTT CGACCTACCA CCAGCCCAGC GCTCACCCGA CCGCTCCGTC GCGCTGCTCA ACCGAGCCTG GAAGTCCGAC GGCTTCCAGG ACGCCGAGCA GTCCTGGCGC TACCGGGACC GCGCCGCGGG CTGGGTGCGC GACTACGTCG AGACCCTCGA CACCACGATC GACCCGATCG GCGTCGAGCG CTGGGTGTCC GCCCCCACCG GCACGATCGT CGCCGAGGGC CGGGTCGACC GGATCGACCT GCGCGGCGAC GAACTGGTGA TCGTCGACTA CAAGACCGGC AAGCACGCCC TCTCCACCGA CGACGCCCGA GGCTCCCAAG CCCTGGCCCT CTACGCCGTG GCCGCCCGCC GCACCCTGCG CAAGCCGTGC GCCAGGGTGG AACTGCACCA CCTGCCGACC GGCTCGGTCG CGGTGTGGGA GCACACCGAG GAGAGCATCG GCAGGCACGT GGCGCGCGCC GAGGAGGCCG CGGACGACAT CGTGCTGGCC GAGAGCACCC TGGCCGCAGG CGCGGACCGC GACGAGGTCT ACCCGCCGAG GGTGGGCAGG CAGTGCTCGT GGTGCGACTT CAGACGCCAC TGCCCAGAGG GCCAAGAGGC CGCGCCGACA CTGGAACCCT GGGCGCTACT CGCCCCCTGA
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Protein sequence | MQEQLGLDFG APPRKLVRVT PAKLATWADC PRRFRMAYVD RPSPGRGGPW AHSAMGAAVH NALKALFDLP PAQRSPDRSV ALLNRAWKSD GFQDAEQSWR YRDRAAGWVR DYVETLDTTI DPIGVERWVS APTGTIVAEG RVDRIDLRGD ELVIVDYKTG KHALSTDDAR GSQALALYAV AARRTLRKPC ARVELHHLPT GSVAVWEHTE ESIGRHVARA EEAADDIVLA ESTLAAGADR DEVYPPRVGR QCSWCDFRRH CPEGQEAAPT LEPWALLAP
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