Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0805 |
Symbol | |
ID | 8324968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 883598 |
End bp | 884557 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 644941347 |
Product | Citrate (pro-3S)-lyase |
Protein accession | YP_003098612 |
Protein GI | 256374952 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2301] Citrate lyase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCGACC GCACGACCCG CTCCCGCCGC TCCTGCCTCG CCGTGCCGGG GTCGAGCCAG AAGATGATCG ACAAGGCGCG CGGCCTGCCC GCCGACGAGG TCTTCCTGGA CCTGGAGGAC GCGTGCGCGC CGCTGGCCAA GCCGGACGCG CGCAGGCGGG TCGTGGAGGC GCTCAACGAG GGCGGGTGGG GGACGCGCAC GCGGGTGGTG CGGGTCAACG ACTGGACCAC CGAGTGGACC TACCGGGACG TCGTGGAGGT CGTCGAGGGC GCCGGGGCGA ACCTGGACTG CCTGCTGCTG CCGAAGGCGC AGAGCGCGGA GCAGGTCGCG GCGCTGGACC TGCTGCTGAC CCAGGTGGAG CGCGCGGCGG GGCACGAGGT CGGCCGGATC GGGATCGAGG CGCAGATCGA GAACGCGCTG GGGCTGGTGA ACGTGAACGC GATCGCGACC GCCTCGCCCA GGGTGGAGGC GCTCGTCTTC GGGCCTGCGG ACTTCATGGC GTCGATCAAC ATGAAGACCC TGGTGGTCGG CGAGCAGCCG CCGGGGTACG ACGTGGGCGA CGCGTACCAC CACATCCTGA TGCAGATCCT GATGGCGGCG CGGGCGCACG GGAAGCAGGC GATCGACGGG CCGTACCTGC AGATCCGCGA CGTGGACGGG TTCCGGCGGG TGGCGGGCCG GTCGGCGGCG CTGGGGTTCG ACGGGAAGTG GGTGCTGCAC CCAGGGCAGA TCGAGGCGTC GAACGAGGTC TACAGCCCCC GGCAGGAGGA CTACGACCAC GCGGAGAACA TCCTGGACGC GTACGAGCAC CACACGTCGG CGGCGGGTGG CGCGCGGGGC GCGGCGATGC TCGGGGACGA GATGATCGAC GAGGCGTCGC GGAAGATGGC GCTGGTGATC TCGGGCAAGG GGCGCGCGGC GGGGATGCGG CGCACGGACG TGTGGACGCC CGAGGGGTGA
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Protein sequence | MADRTTRSRR SCLAVPGSSQ KMIDKARGLP ADEVFLDLED ACAPLAKPDA RRRVVEALNE GGWGTRTRVV RVNDWTTEWT YRDVVEVVEG AGANLDCLLL PKAQSAEQVA ALDLLLTQVE RAAGHEVGRI GIEAQIENAL GLVNVNAIAT ASPRVEALVF GPADFMASIN MKTLVVGEQP PGYDVGDAYH HILMQILMAA RAHGKQAIDG PYLQIRDVDG FRRVAGRSAA LGFDGKWVLH PGQIEASNEV YSPRQEDYDH AENILDAYEH HTSAAGGARG AAMLGDEMID EASRKMALVI SGKGRAAGMR RTDVWTPEG
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