Gene Amir_0801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0801 
Symbol 
ID8324964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand- 
Start bp880438 
End bp881028 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content72% 
IMG OID644941343 
Productprotein of unknown function DUF1003 
Protein accessionYP_003098608 
Protein GI256374948 
COG category[S] Function unknown 
COG ID[COG4420] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.765445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAGC CACAGGGACG ACGGCGGCTG GACCAGCCGC GCTCGGCGGG CCGGTTCCGG 
CTGTCGCTGG ACCCGGACGC GTTCGGCAGG CTCTCCGAGC GGCTGGCCAG GTTCCTCGGG 
ACGGGCACGT TCCTGTTCTG GCAGACCATC ATCGTGGTCG CGTGGATCGC GGTGAACCTG 
CTCGCGGTGT CGCTGCGCTG GGACCCGTAC CCGTTCATCC TGCTGAACCT GGCGTTCTCC 
ACCCAGGCCG CGTACGCCGC GCCGCTGATC CTGCTGGCGC AGAACCGGCA GGACGACCGG 
GACCGGGTGT CGCTGGAGGA GGACCGGCGG CGGGCCGAGC AGACCAAGGC GGACACCGAG 
TACCTGGCGC GGGAGCTGGC GGCGCTGCGG ATCGCGGTGG GCGAGGTCGC GACGCGGGAC 
TTCCTGCGCG GCGAGCTGGA CCGGGTGTTC CGCGAGGACC GGAAGAAGAG CGGGAAGTCG 
AAGAAGCAGC GCGAGGAGCG GGACGGCGAC GAGCGGGAGC CCGGCGAGGG CAAGGGGCGC 
AAGGACGACA GCCGGTGGGA CGACCCGAAG CTGGACGACG TCCGGTCGTA G
 
Protein sequence
MPEPQGRRRL DQPRSAGRFR LSLDPDAFGR LSERLARFLG TGTFLFWQTI IVVAWIAVNL 
LAVSLRWDPY PFILLNLAFS TQAAYAAPLI LLAQNRQDDR DRVSLEEDRR RAEQTKADTE 
YLARELAALR IAVGEVATRD FLRGELDRVF REDRKKSGKS KKQREERDGD EREPGEGKGR 
KDDSRWDDPK LDDVRS