Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0793 |
Symbol | |
ID | 8324956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 872197 |
End bp | 873384 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 644941335 |
Product | glycogen synthase |
Protein accession | YP_003098600 |
Protein GI | 256374940 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | [TIGR02149] glycogen synthase, Corynebacterium family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGCCGA CTACCGTGAC CGGTGTGCGA ATTGGACTGC TGACTCGGGA GTACCCGCCG GAGGTCTACG GCGGGGCTGG GGTGCACGTC GGTTTCCTGG TGCCGAGGTT GCGCGAACTG GTCGAGGTGG ACGTGCACGC GTTCGGCGGG CCGAGGCCCG ACGCGACCGC GCACACCCCG GCGCTGGAGC TGGCCGGGGC GAACGCCGCG CTGGGGGTGC TGTCGGCCGA CCTCGGCATG GCGGCGGCGC TGGGCGGGGT CGACCTGGCG CACTCCCACA CCTGGTACGC CAACCTGGCG GGGCACCTGG CGAAGCTGCT GCACGGGGTG CCGCACGTGG TGACGGCGCA CTCGCTGGAG CCGCGCAGGC CGTGGAAGGC CGAGCAGCTC GGCGGCGGGT ACCGGGTGTC GTCGTGGGTG GAGCGGACCG CGTACGAGGC GGCGGACGCG GTCATCGCGG TGAGCGAGGG GATGCGGGCC GACGTGCTGG ACTGCTACCC GGCGCTCGAC CCGGCGCGGG TGCACGTGGT GCGCAACGGG ATCGACACGC GGGAGTACCG GCCGGTCGAC GACGTGGACG CCCTGGTGGC CAACGGGATC GACCCGGACC GGCCGATCGT GGCGTTCGTC GGGCGGATCA CCAGGCAGAA GGGCGTCGGG CACCTGGTGG CCGCGGCGCA CCGGATCTCG CCGGAGGCGC AGGTCGTGCT GTGCGCGGGC GCGCCGGACA CCCCGGAGAT CGCCGAGGAG ACGCGGGTCG CGGTCGCCGA GCTGTCGGCG GCGCGGCCGG GGGTGGTGTG GTTGCAGGGG ATGCTGCCGA CGGACCAGGT GAAGCAGATC CTGAGCCGGG CGGCGGTGTT CGTGTGCCCG TCGGTGTACG AGCCGCTGGG GATCGTGAAC CTGGAGGCGA TGGCCTGCGG GACCGCCGTG GTGGCCTCGG ACGTGGGCGG CATCCCCGAG GTGGTGCGGG ACGGCGAGAC CGGGCTGCTG GTGCACTACG ACGCCTCGGA CGAGGCGGCG TTCCGGACGG GGTTGGCGGA CGCGGTGAAC GCGCTGCTGG CCGATCCGGC GCGGGCGGCG GCGTTCGGCG CGGCGGGGCG GGAGCGCGCG GTGCGGGAGT TCTCCTGGGG AACGGTCGCC GGGCAGACGG TGGACGTGTA CCGGGCGGCG CTGGAAAACA CGCGCTAG
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Protein sequence | MGPTTVTGVR IGLLTREYPP EVYGGAGVHV GFLVPRLREL VEVDVHAFGG PRPDATAHTP ALELAGANAA LGVLSADLGM AAALGGVDLA HSHTWYANLA GHLAKLLHGV PHVVTAHSLE PRRPWKAEQL GGGYRVSSWV ERTAYEAADA VIAVSEGMRA DVLDCYPALD PARVHVVRNG IDTREYRPVD DVDALVANGI DPDRPIVAFV GRITRQKGVG HLVAAAHRIS PEAQVVLCAG APDTPEIAEE TRVAVAELSA ARPGVVWLQG MLPTDQVKQI LSRAAVFVCP SVYEPLGIVN LEAMACGTAV VASDVGGIPE VVRDGETGLL VHYDASDEAA FRTGLADAVN ALLADPARAA AFGAAGRERA VREFSWGTVA GQTVDVYRAA LENTR
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