| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0782 |
|---|
| Symbol | |
|---|
| ID | 8324945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | - |
|---|
| Start bp | 861347 |
|---|
| End bp | 862234 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 644941325 |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003098590 |
|---|
| Protein GI | 256374930 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.876045 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTATGGTT ACGGCGTGGA GAACAGCAGC TCAGGGGTGG CGGAGACAGC GGAAACCCAG
GTCACGGGCG TGGGCGCGGG TGACGCGGGG GTGAGCGCAG GCGCGCGTGA CGCGGGCGTG
GACGTCCCGC ACGCGGCTGG TGAGAGCGCG GCCGAGGCTC CCGCGCGCAA GCCCGCCCGC
AGGCGGAACC GGCGGGGCGA GGGGGCCAAG CTGCGGGAGG AGATCGTCGA CGCCGCCACC
GCGATCCTGG ACGAGGAGGG TGACGAGCGG CTGGTCACGC TGCGGTCGGT CGCGCGGCGG
ATCGGCATCG CCGCGCCGTC CATCTACCCG CACTTCCCCG ACCAGCCGTC GATCATGATG
GCGGTGGTGC GGCGGGAGTT CGAGGCGCTG GCCGGGCAGC TGCGGGAGGC CCGCGACCGG
GAGGTCGACC CGCGCGAGCG GCTGGTCGCG ATCTGCCTGG CCTACCTGGA GGTCGCCCGC
GCCCACCCCG GCCGGTACCG GACCATGTTC GGCGGGCTCT GGATGCCCGA CCTGGACACC
GGCTCGATCA CCGCCGAGGA GCTGATGTCC CTGGGCAACG AGCCCCTGGA GGTGCTGGTC
GTGGCGCTGG AGGCGTGCGT GGAGGCCGGT CAGGCCACCA GCGACGACCT GTTCGCCGAC
GCGGTCGCGC TGTGGATGGG GCTGCACGGG CTCGCCCACC AGCGGTCGGT CACCCGCGCG
TTCCCCTGGC CGGACGACAT CGAGCTGCGG ATCATCGGCG CGCTCGCGCA CCTCACCGGG
ACGGGCGACG GGACCGGTTC GGCCGCACCC CAGCCGGTCA CGCCCCAGCC GGTCACGCCC
GAGTCGGCCG GGCCCCAGCC GGTCACGCCC GAGTCGGCCG GGCCCTGA
|
|---|
| Protein sequence | MYGYGVENSS SGVAETAETQ VTGVGAGDAG VSAGARDAGV DVPHAAGESA AEAPARKPAR
RRNRRGEGAK LREEIVDAAT AILDEEGDER LVTLRSVARR IGIAAPSIYP HFPDQPSIMM
AVVRREFEAL AGQLREARDR EVDPRERLVA ICLAYLEVAR AHPGRYRTMF GGLWMPDLDT
GSITAEELMS LGNEPLEVLV VALEACVEAG QATSDDLFAD AVALWMGLHG LAHQRSVTRA
FPWPDDIELR IIGALAHLTG TGDGTGSAAP QPVTPQPVTP ESAGPQPVTP ESAGP
|
|---|
| |