Gene Amir_0746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0746 
Symbol 
ID8324909 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp821679 
End bp822713 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content71% 
IMG OID644941289 
ProductABC transporter, periplasmic binding protein, thiB subfamily 
Protein accessionYP_003098554 
Protein GI256374894 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4143] ABC-type thiamine transport system, periplasmic component 
TIGRFAM ID[TIGR01254] ABC transporter periplasmic binding protein, thiB subfamily 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCCGAC GTGCCCTGTC CGCCGCTCCG CTGGTCGTGC TGCTGGCCGC CTGCTCCGTC 
GCGGGCAACC AGCCCGCCGC GCCCGGCGAG CGCGTGGTCA CCCTGGTCAC CCACGACTCG 
TTCGCCGTCG ACCAGGCGCT GCTCGACGAG TTCAAGTCCG ACACCGGCAT CACGATCAAG 
CCGCTGGCCA GCGGCGACGC CGGGGAGCTG ACCAACAAGC TGGTCCTCAC CAAGGCCAAC 
CCCATCGGCG ACGTCGCGTT CGGCGTCGAC TCGACGTTCG CCTCCCGCGC CCTCAAGGAG 
AGCGTCTTCG CCGAGTACAC CTCGCCGGAG GGCGACAAGG GCGCGCAGCG CTACCAGCTC 
GAACCCGCGA ACCGCCTGCA CGCCGTCGAC GTCGGCGACG TCTGCCTCAA CGTCGACGTC 
GCCGCCCTCA AGGACGTCGG CGAACCGCAG AAGCTCTCCG ACCTGGCCGA CCCGAAGTAC 
CGCGACATGC TCGTCGTCGA GGACCCGGCC ACCTCCTCGC CCGGCCTGGC GTTCCTGCTG 
AACACCATCG CCACCTTCGG CGAGGAGAAC TGGACCAACT ACTGGGGCCA GCTCAAGGCC 
AACGGCGTCA AGGTCGTCAG CGGCTGGGAG GAGGCCTACA ACCAGGACTT CTCCGGCTCC 
GCGGGCAAGG GCCCGCGCCC GATCGTGGTC TCCTACGCCT CCTCGCCCTC GGCGGAGATC 
GGCGACGACG GCGCGCCGCG CACCAAGGCC CTCCTCGACA CCTGCTACCG GCAGGTCGAG 
TACGCGGGCG TCCTGGAGAA CGCCAAGAAC CCCGAGGACG CCAAGAAGGT CCTGGACTTC 
CTGCTGGGCG CGGACTTCCA GGCCCAGGTG CCCGAGCAGA TGTACGTCTA CCCCAGCCGC 
GAGGACATCC CGCTGCCCGA GGCGTGGGCC AAGGCCGCGC CCCTGCCCGC GAACTCCCGC 
ACCCTGCCCG CCGACCAGGT GGACGCCGGG CGCGAGCAGT GGGTCCAGCA GTGGCGCACC 
CTCGTCCAGG GCTGA
 
Protein sequence
MLRRALSAAP LVVLLAACSV AGNQPAAPGE RVVTLVTHDS FAVDQALLDE FKSDTGITIK 
PLASGDAGEL TNKLVLTKAN PIGDVAFGVD STFASRALKE SVFAEYTSPE GDKGAQRYQL 
EPANRLHAVD VGDVCLNVDV AALKDVGEPQ KLSDLADPKY RDMLVVEDPA TSSPGLAFLL 
NTIATFGEEN WTNYWGQLKA NGVKVVSGWE EAYNQDFSGS AGKGPRPIVV SYASSPSAEI 
GDDGAPRTKA LLDTCYRQVE YAGVLENAKN PEDAKKVLDF LLGADFQAQV PEQMYVYPSR 
EDIPLPEAWA KAAPLPANSR TLPADQVDAG REQWVQQWRT LVQG